Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0653 ATGAGTATGCACATTTTCCTTAAAAAAGATCAAAAACTTATATGCCCTGTAAAGTGTTCTGATCCACCAGTTGAACTGCCACAAGAGTTAATCATAAAGTGTATGTTTAAACAGAAGAAGATGTCTGGGCTTTCTAAATTGCCCCAATTTCCACTTACCCGCGCGCCATCCAATCCACGTGATGAGTATGAGTGGGAGAAGTTCTTGAGTTTCCTGCACGAACATGACCGTGTTGCTTATGGAGAGTTTGAGCAGATCAAGTTTTACATTCTTCCTCCTGCTAAAGCCTCAAAATTTAGCCCAATCAGTTTTGAATACCAAATAGACCACACACGTACTGTAGATACTCGTCCGAGGGATTGTGAATCAGCAGGTTCGCACTTAGCTGAGGAATGTGTTGGACAGGTTAATGCCATGGGGAGATGTCTAGCAAACGGTGCAGATGTTTGCTCTTCAGATCTTAAGATTCCTCCCGTTGAAGATCGTGCTAATCGTTTTACTGCTGAAACTTGTGGTGGATATCAATCTCACGTGAAGCAGGATAGAATCCTTGAGAAAAATTTAATTCGGGTAGACCCAAGTTACCTGAAAACTCTTGGACAGGCTCACTCTGGATGGGTTTTTGGTGGAATAGCAGAGCTTGTTGATAATTCAAGGGATGCTAAAGCTACTAAGATCGATATTTCTGTAGATATGATAAAGCTGGAGAAATCTGGGAAGGATGTTCCGATGTTGTCAGTTATTGATGATGGTCAAGGGATGGACCATGATGAGGTTGTGAAAATGGTGTCTTTTGGACACAAGCAACTTGATAAAGATGACAAGGATCACATTGGCAGGTTTGGTGTTGGATTCAAGACAGGAGCAATGAGGCTTGGGAGAGATGTGCTTGTTCTTACCCAGACTGCTAATTCAAGATCAATAGCATTTCTTTCACAATCATTGAATGAAGGCAAAGATAATATCGAGATTCCCATAGTTAGTTACAGACGACAGGGACAACGTATGGAAGTTGATACTAATGTTCAATCAGAAGCTCTTTCAAAGTCCAATTTGAAAGCTATTAAGGAATATTCACCGTTTGACAAGTACCTAATTGGTGAAAAGACAGCTTTGTTTAGCGGTGGTTCGGGAACGCAAATATATATATGGAACTTGGACCGATGGGGGTCAGAATATTGTCTTCAGTGGCAAAATGGTTTGAAAGGTGGAAGTTCATTCCACCAAGGTGACATTCTAATCCGCAGCAGAAGAAGTCGCTCTCGTCCAGGGCAAATTAATCAAAAGGTTCCATTGGATTACTCACTGCGAGCTTATTTAGAAGTCATCTTCTTAGTTCCACGAATGAAGATGAGTGTTCAAGGGACACTGGTTAAAAGTCGTCCACTGGCAAATTTCCTGACTAAAACTGTTATCGAAACTGGTATAATCTTGGGAAGGCCTGTTGAATTAACTCTAGGGTTCAGTCAATTAGAATGGGAGCAAGCAAGCTGTGGAATATTTTTGTACTGGCATGGTCGCTTAATTGAGGCTTACAAAAGAGTTGGTGGCATGATTCATAGTGCAGATGTGGGACGGGGTGTAATTGGTGTCGTAGATGTGTCCAACTTAATGGATGAGCAGGATGGTCGTGTGTGGGTGCATAATAACAAACAGGGATTCCAAGATTGTCAATCGTATGCATCTCTTGAGGAGTGGCTTGGTAGAAGAGCAGATCAATATTGGGACAAGAATTTTGATTCACTTGAGTTGGACAAAGGTAATTGTGTCTACAAACCCGATTGCGAATGGGTCCAGTGTGACAAGTGCAGAAAGTGGAGAATATTGCCTCCTGATTTCGACAGCATGAGCTTACCTACTCAATGGTTCTGTTATATGGAGCCTTTCAAAGGTAAATGTGCAGATGTTGAACAAAAGCAGAAGCCTGGCATAGTCGTCGTTTCCACAAAGCGATCTACAGATGATTGCGTGCTGAAAGATTCTGATAGTACAATGATTGAAGCTGATACGGATGCTTCTGGATCAGATGAAAAATTGGCCAAAGCTGAGGATTTCAAATCTACAAACTTAAAGCGGTTGAAAAGGGGACTTCCAAGATATGAGGATGCCAGATCCCCGTCTTCAACAAAGCCGAGAAAGGGATAA 2145 0.4186 MSMHIFLKKDQKLICPVKCSDPPVELPQELIIKCMFKQKKMSGLSKLPQFPLTRAPSNPRDEYEWEKFLSFLHEHDRVAYGEFEQIKFYILPPAKASKFSPISFEYQIDHTRTVDTRPRDCESAGSHLAEECVGQVNAMGRCLANGADVCSSDLKIPPVEDRANRFTAETCGGYQSHVKQDRILEKNLIRVDPSYLKTLGQAHSGWVFGGIAELVDNSRDAKATKIDISVDMIKLEKSGKDVPMLSVIDDGQGMDHDEVVKMVSFGHKQLDKDDKDHIGRFGVGFKTGAMRLGRDVLVLTQTANSRSIAFLSQSLNEGKDNIEIPIVSYRRQGQRMEVDTNVQSEALSKSNLKAIKEYSPFDKYLIGEKTALFSGGSGTQIYIWNLDRWGSEYCLQWQNGLKGGSSFHQGDILIRSRRSRSRPGQINQKVPLDYSLRAYLEVIFLVPRMKMSVQGTLVKSRPLANFLTKTVIETGIILGRPVELTLGFSQLEWEQASCGIFLYWHGRLIEAYKRVGGMIHSADVGRGVIGVVDVSNLMDEQDGRVWVHNNKQGFQDCQSYASLEEWLGRRADQYWDKNFDSLELDKGNCVYKPDCEWVQCDKCRKWRILPPDFDSMSLPTQWFCYMEPFKGKCADVEQKQKPGIVVVSTKRSTDDCVLKDSDSTMIEADTDASGSDEKLAKAEDFKSTNLKRLKRGLPRYEDARSPSSTKPRKG* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0653 714 Gene3D - 201 368 IPR036890 -
Lja2g0653 714 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 3 699 IPR045261 GO:0016887
Lja2g0653 714 Pfam CW-type Zinc Finger 596 638 IPR011124 GO:0008270
Lja2g0653 714 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 204 363 IPR036890 -
Lja2g0653 714 ProSiteProfiles Zinc finger CW-type profile. 591 641 IPR011124 GO:0008270
Lja2g0653 714 PANTHER OS06G0622000 PROTEIN 3 699 - -
Lja2g0653 714 Pfam Morc6 ribosomal protein S5 domain 2-like 434 575 IPR041006 -
Lja2g0653 714 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 210 331 - -
Lja2g0653 714 MobiDBLite consensus disorder prediction 695 714 - -
Lja2g0653 714 Gene3D - 588 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0653 Lja-Chr2 5897807 5909336 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0653 - - gmx:100782161 1007.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0653 2 5897807 5909336 Lja2g0653 2 5897807 5909336 ECH