Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0634 ATGTTTGTCAAGAAGCTCGTGGAGAAAGCTTCCATAAAGAAGATCGGTGGAAATTCATCAGATGGGTTAAAAGGCAGTGATGTAGATCCACGTCTGATATTTCATCAAGGGGTACCATCAGATGGTGACAAAGTCGCCTATGACAATATTCAGAAAATACTAGCTATTTCTACCAAGGATGGACGAATTAAACTATTTGGAAAAGACAATTCTCAAGTCCTTCTTATATCTAGTGAGCTAGTGCCTAGCAAGTTTTTACAGTTTATACAGAATCAAGGCATCCTTATAAATGTCACTTCCAATAACCATATTGAGGTTTGGGACATAGACAGAAAACTATTGTGTGATGTGTACATTGTTAAAGCAAAAATAACTTGTTTTGAAGTCATCCAACACAGCCTCTATATGTATTTTGGAGATTCTAATGGTAATATTTCAGTTTTGAAACTTCATAAAAAACCATGGTATGTGGTACAGATGAAGTACATCATACCCCTCTCAGCTTCATATGGGAATCCAACTGAAGTGTCTGATGACACAGTTGTGACACATATTCTGCCTCAACCAGCAGCTGAAAGCCAAAGAGTTCTCATAATCTTCAGAAATGGCCAAATAATATTATGGGATATTCGAGAAAGCAAAACCATTGCAAGAACAGGAGGAAATATGTCACAGCCACTGCATAATGAATCAAAGAGAGTGTCTTGTGCATGTTGGGTGTGTCCTTTTGGAAGTAAGGTGGTTGTAGGGTACAGCAATGGAGAGCTCTTCATTTGGAGCATCCCTTCCCTAAACAGAACAAGTGGTTCAGCATCTGATCTTAATAGTCAAAAAACTCCTATATTTAAACTTAACTTAGGATATAAATCAGACAGAATTTCCATAAGATCAGTAAAATGGATTTATGCTGAAGGAAAAGCTAGTCGACTATATGTCATGGGAGCTTCAAACTTGTTGCAGGTAGTGTTGTTGAATGAACACATTGAATCTCGCACAATTAAGTTGGGGCTTAGTTTGTTTGAATGCTGTATTGACATGGAGATCATATCAACCTCAAGTGAGCAAAGCAAGCAGAAACAAAATTCTTTGCTTTTGCTTGGGAAATCAGGCCACATATACTTGTATGATGATAATTTGATTGAAAGGTATCTACTGCAATCCCAGTCTAAGTCCAATCCCTCACTACCAAAGGAAGTGGCTGTGAAGTTACCACTAGCAGATTCAAGCATCACAACAGCAAAATTCATCTCCAACAATCCCAATATGTTTAATTCTAAAGATGAGGATTACAGTCAGATGGTCAAAAACTACCCGCCACTTATTCCAATTGAAACAAATCACAAAGATGGGATTAACATGAGTTCTGCAAACTTCACTGGATTTTCAAATGTTAAAAATCTGTACATAACTGGACATAGTAATGGAGCCATCACTTTTTGGGATGCATCATGTCCCTTTTTCATCCCAATTTTGCAGATAAAGCAACAGAGTGATAGCAATTTTTCATTAAGTGGCATACCTTTGACAGAATTATATTTTGATATCAACTCTCCTCTCCTTGTTTCTGGTGATCAGAGTGGAATGGTTCGAATAATTAGATTCAAACCCGAACCATATGCATTCAACAGTTTCATGTCTCTTACTGGAGGTACAAAAAAAGGTGCTGATCATGTAATCTGCAGTGTGAAACTTGTGAAGACTATTGGTGCTGTAACTTGTATGAACATAGATCACATATCAGGGCATCTTGCTGTTGGTTCTGACCAAGGAAATGTTTCAGTTATTGACATGGATGGCCCATCTCTGTTATATCAGAAACATATTGCTAGTGAATTTTCTACTGGTATCATCTCTCTGCAGTTCATAACCTGCAGTTTAAATGGTTTTGAGAAAAACATTTTAGTAGTTGGAACAATGGACTCATCTGTTCAGGCACTACATAGTGAAACTGGAAATACATTGTGCCCTGAAAGTGTTCATCCTACGAAGCCCTCTAAGGCTCTATTTATGCAGGTGTTAGATAGACAAAGAAAAACTATCATAGGATCAATTACCAAAGATGGCTTAAGCTTGAGAGAAGGAAATCAAATTGAGGATGCAACAACAAAACAATTATACGTCTTACTGTGTTCTGAGAAGGCCTTGTATGTCTATTCTTTTGAGCATGCTCTGCAGGGAATCAAAAAAGTGCTTTACAAAAAGAAGTTTCATTCTTCTTCCTGTTGCTGGGCATCAACATTTTATAGCCCCTCTGATATCGGTCTCACACTTCTTTTCAGCAGTGGAAAAGTAGAATTAAGGTCTTTGCCAGAGTTATCTCTGATAGTGGATACTTCAATTAGAGGTTTCACTTATTCACCTCCAAAATTGAAGTCACCTTCTGAACACCAAATATGCTGTTCATCCAGAGGAGATATTGTTTTGGTGAACGGTGACCAGGAAATTTGTGTTGTCTCATTGTTGGTCCAGAGAAACATTTTCAGACTTTTGGACTCTGTTAGCTGCATCTACAGGAAGGAAATGATGCTATCACAAGAAAATCTTGTTTCTGGCTCAGCCATCCACAAGGAAAATAAAAGGGGCATATTCAGCTCCGTTATGAAAGATTTTACAAGCAGTAAAGAAAAACAAATGCTCATCATGGAAAAAGAAGATCCTGAAGAAGGTATCCAGGAACTCTCAGCAATCTTTTCAAATGCAAATTTTCCATCGGGTGATAACAATAATGATAATCCAACTGAAGATGAAAATCAGCTGGAATTAAACATAGATGACATTGACCTAGAGGATCATGCAGAAAAACGCAAAGAACCACACTTATTAGGAGCTTTTAATAAGAACTTGGCCGGCAAATTTCAGGCTCTGAAAGGAAGATTGAAAGAGAAGAAGGGAAACAACCAGAAAGCTTCAGATAACGAAGAACAGCAACATGAGAAAACTGGTGAAGTCGATCAGATTAAGAAGAAATATGGATTTTCTTCTTCCTCAGATGAAACAGGCGTTGCTAATTTGGCAAAAAGCAAGCTGCAGGAAAACACAAGAAAGTTGGAGGGTATCAGGCTACGTACTACAGAGATGCAAGATACAGCAAAATCATTTTCATCACTGGCAAAACAAGTGCTAAGAAATGCTGGGCAGGATAGACGGAATTGA 3153 0.3787 MFVKKLVEKASIKKIGGNSSDGLKGSDVDPRLIFHQGVPSDGDKVAYDNIQKILAISTKDGRIKLFGKDNSQVLLISSELVPSKFLQFIQNQGILINVTSNNHIEVWDIDRKLLCDVYIVKAKITCFEVIQHSLYMYFGDSNGNISVLKLHKKPWYVVQMKYIIPLSASYGNPTEVSDDTVVTHILPQPAAESQRVLIIFRNGQIILWDIRESKTIARTGGNMSQPLHNESKRVSCACWVCPFGSKVVVGYSNGELFIWSIPSLNRTSGSASDLNSQKTPIFKLNLGYKSDRISIRSVKWIYAEGKASRLYVMGASNLLQVVLLNEHIESRTIKLGLSLFECCIDMEIISTSSEQSKQKQNSLLLLGKSGHIYLYDDNLIERYLLQSQSKSNPSLPKEVAVKLPLADSSITTAKFISNNPNMFNSKDEDYSQMVKNYPPLIPIETNHKDGINMSSANFTGFSNVKNLYITGHSNGAITFWDASCPFFIPILQIKQQSDSNFSLSGIPLTELYFDINSPLLVSGDQSGMVRIIRFKPEPYAFNSFMSLTGGTKKGADHVICSVKLVKTIGAVTCMNIDHISGHLAVGSDQGNVSVIDMDGPSLLYQKHIASEFSTGIISLQFITCSLNGFEKNILVVGTMDSSVQALHSETGNTLCPESVHPTKPSKALFMQVLDRQRKTIIGSITKDGLSLREGNQIEDATTKQLYVLLCSEKALYVYSFEHALQGIKKVLYKKKFHSSSCCWASTFYSPSDIGLTLLFSSGKVELRSLPELSLIVDTSIRGFTYSPPKLKSPSEHQICCSSRGDIVLVNGDQEICVVSLLVQRNIFRLLDSVSCIYRKEMMLSQENLVSGSAIHKENKRGIFSSVMKDFTSSKEKQMLIMEKEDPEEGIQELSAIFSNANFPSGDNNNDNPTEDENQLELNIDDIDLEDHAEKRKEPHLLGAFNKNLAGKFQALKGRLKEKKGNNQKASDNEEQQHEKTGEVDQIKKKYGFSSSSDETGVANLAKSKLQENTRKLEGIRLRTTEMQDTAKSFSSLAKQVLRNAGQDRRN* 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0634 1050 MobiDBLite consensus disorder prediction 1010 1024 - -
Lja2g0634 1050 MobiDBLite consensus disorder prediction 959 986 - -
Lja2g0634 1050 MobiDBLite consensus disorder prediction 959 1050 - -
Lja2g0634 1050 Gene3D - 445 688 IPR015943 GO:0005515
Lja2g0634 1050 MobiDBLite consensus disorder prediction 1025 1041 - -
Lja2g0634 1050 SUPERFAMILY WD40 repeat-like 445 727 IPR036322 GO:0005515
Lja2g0634 1050 Gene3D - 43 392 IPR015943 GO:0005515
Lja2g0634 1050 PANTHER TRANSDUCIN/WD40 REPEAT PROTEIN 1 1049 - -
Lja2g0634 1050 MobiDBLite consensus disorder prediction 989 1009 - -
Lja2g0634 1050 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 1 1049 - -
Lja2g0634 1050 SUPERFAMILY Putative isomerase YbhE 52 537 - -
Lja2g0634 1050 Coils Coil 952 972 - -
Lja2g0634 1050 SMART WD40_4 110 149 IPR001680 GO:0005515
Lja2g0634 1050 SMART WD40_4 220 260 IPR001680 GO:0005515
Lja2g0634 1050 SMART WD40_4 494 533 IPR001680 GO:0005515
Lja2g0634 1050 SMART WD40_4 436 481 IPR001680 GO:0005515
Lja2g0634 1050 SMART WD40_4 561 596 IPR001680 GO:0005515
Lja2g0634 1050 CDD R-SNARE_STXBP5_6 985 1042 - -
Lja2g0634 1050 Pfam Lethal giant larvae(Lgl) like, C-terminal 568 826 IPR013905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0634 Lja-Chr2 5689891 5700577 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0634 - - gmx:100782049 1571.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0634 2 5689891 5700577 Lja2g0634 2 5689891 5700577 ECH