Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0623 ATGATGGAGAAGGCAGATTCTGTGCAGAAGCTGTACACGCGGATGCGGCTCTGGGAGTTTCCGGAGCAGTATGTGATTGAGCCGACGGATGGATCATCTGGTTCTTCTTTGGCGGTTAGCAGAGTGGATGGCTCCATGAAGCTCATCGATGAGGTTCCAGAATGCAGCTCCGTTCGAGTTCCGAAGATTTATACGATATTCGGTGTTGTTGGCATGTTGAGGCTTTTGGCTGGATCATATTTGCTAGTTATAACTGAGCGTGAATGTGTTGGATCTTACTTGGGGCATCCAATTTTCAAAATTTCATCCATGAAGGTTTTTCCATGTGATCATTCTCTTAAGAATACCCCTGCCGAACAGAAGAAGACAGAGATGGAATTTTCCGGTTTACTAAATGTTGCTGAGAAGACCTCTGGTCTGTTCTTCTCGTATGAAACTAATTTAACTCTGAGTGCACAACGACTGAATGACTTGGGTGATGAATCTAGATTGCTTCCTCTGTGGAGACAGGCAGAACCTCGATATCTATGGAACAATTATATGTTAGAAGTGCTCATAGATAACAAGCTTGACCCATACTTACTCCCTGTAGTCCAAGGCAGCTTTCATCACTTTCAAGCAGCCATCGGGAAAGATATTATTGATATTACTTTGATTGCTAGGAGATGCACAAGAAGAAATGGAACTCGGATGTGGAGAAGAGGAGCTGATCCTGATGGGTATGTAGCCAATTTTGTGGAAACAGAACAAATTATGCATTTCAATGGGTACACAGGTTCATTTGTTCAGGTTCGTGGTTCAATTCCACTGCTCTGGCAGCAAATTGTTGACTTAACATATAAACCGAAGTTTGAATTATTGAAACCTGAAGAAGCTCCACGAGTCGCTGAGAGGCATTTCTTAGATTTAAGAAAAAAATATGGAGCAGTGTTGGCTGTTGATCTTGTTAACAAGCATGGAGGAGAAGGGCGGCTGTGTGAAAAATTTGGCGATGCAATGCAGCATTTGGCTGGTGATGATGTAAGATATGTGCACTTTGATTTTCATCATGTTTGTGGGCACATACATTTTGATCGTCTCTCCATCCTCTATGATCAAATTTCAGATTTTCTTGAGAGAAACGGATATCTTCTTTTGAATGAAAAGGGAGAGAAAATGAAGGAGCAACTTGGAGTTGTTAGGACCAATTGTATTGATTGTCTAGACCGTACAAATGTTACTCAGAGCATGATAGGCCGGAATATGTTGGAATACCAGCTTAGAAGGCTTGGTGTCTTTGGTGCTGAAGAAACAATTAGTTCACATCCAAATCTTGATGAACGCTTTAAGATCTTGTGGGCTAATCATGGGGATGATATAAGTAGTCAATATTCGGGAACTCCTGCACTAAAAGGAGACTTTGTCAGATTTGGGCACCGCACAATGCAAGGGATAGTTAACGATGGTCGGAATGCTCTTCTAAGATATTATTTGAATAACTTTTGTGATGGAACAAAACAGGATGCAATTGATCTCCTGCAAGGACATTATATAGTTTCTGTCGGCCGAGATAAAGCTGCCTCAGCTCAGAAAGGAGGCCTTGAAGCTATAGCTTCATTTCCGCTGGCTTTGGGTCTGGTTTTGATCGGATTTCTTTTTGCAACCATGTCATTGAGGCAAGTTCGATATGATTTTCGGCACTTGTTCTTTTCGCTAATGTGGGCAAGCATTAGTGTTGGTATAGCAGCATTTGTGAGGGCCAACGGCCGGGTTTTCTGCAACAGACCTCGCCTACACAATCCCCGGGTTTAA 1791 0.4238 MMEKADSVQKLYTRMRLWEFPEQYVIEPTDGSSGSSLAVSRVDGSMKLIDEVPECSSVRVPKIYTIFGVVGMLRLLAGSYLLVITERECVGSYLGHPIFKISSMKVFPCDHSLKNTPAEQKKTEMEFSGLLNVAEKTSGLFFSYETNLTLSAQRLNDLGDESRLLPLWRQAEPRYLWNNYMLEVLIDNKLDPYLLPVVQGSFHHFQAAIGKDIIDITLIARRCTRRNGTRMWRRGADPDGYVANFVETEQIMHFNGYTGSFVQVRGSIPLLWQQIVDLTYKPKFELLKPEEAPRVAERHFLDLRKKYGAVLAVDLVNKHGGEGRLCEKFGDAMQHLAGDDVRYVHFDFHHVCGHIHFDRLSILYDQISDFLERNGYLLLNEKGEKMKEQLGVVRTNCIDCLDRTNVTQSMIGRNMLEYQLRRLGVFGAEETISSHPNLDERFKILWANHGDDISSQYSGTPALKGDFVRFGHRTMQGIVNDGRNALLRYYLNNFCDGTKQDAIDLLQGHYIVSVGRDKAASAQKGGLEAIASFPLALGLVLIGFLFATMSLRQVRYDFRHLFFSLMWASISVGIAAFVRANGRVFCNRPRLHNPRV* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0623 596 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC6 10 595 IPR030069 GO:0052866
Lja2g0623 596 Pfam SacI homology domain 67 352 IPR002013 GO:0016791
Lja2g0623 596 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 10 595 - -
Lja2g0623 596 ProSiteProfiles Sac phosphatase domain profile. 131 459 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0623 Lja-Chr2 5603404 5614204 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0623 2 595 Acyl Lipid Metabolism Gene Families AT3G51460 76.174 0.0 986
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0623 K21797 - gmx:100780963 1131.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0623 2 5603404 5614204 Lja2g0623 2 5603404 5614204 ECH