Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0614 ATGGCTTGTGTGAGCCACCACCACCACCACCACTACCGCCACCGTAACTCGCTCGCTCTCCCCAACATGCTCTCCGGCGCCGCCCACCACCGCCGCCGCCTCCAAAACGACGCTCCTGAACCCGACCACCACCGCCCTACTCTCGCCTCCGCCTACCGCCTCGAGAAAGTCTTCCCTGTTTACGCCATGGGAGCTGCCGACCCGGAACCAGAACCCGACTTGGACGGACCCGACCCGATATGGGACGCTGTTAGAGAAGAAGCTAAGCTCGAAGTAGAAAAGGAACCGATTTTGAGTAGCTTCTTGTATGCAAGTATCTTGGCTCATGATTGCTTGGAGCAAGCAGTGGCGTTTGTTGCGGCCAACCGTCTGCAGAACCCTACCCTTTTGGCAACTCAGCTGATGGATATATTTTGCAATGTCATCATGCATGACAAAGGTATCCAGCGATCCATTCGCCTCGATGTTCAGGCATTTAAGGATCGGGACCCTGCTTGTTTGTCATATTGCTCAGCAATTTTGTACACGAAGGGTTACCATTCACTGCAAGTATATCGAGTAGCCCATGCATTGTGGCACCAGGGACGCAAAGTCTTGGCCTTGGCTTTACAAAGCCGTGTTAGTGAGGTTTTTGGGGTGGACATTCATCCTGCTGCGAAGATTGGGGAGGGAATTTTATTAGATCATGGGACGGGCGTGGTTATTGGTGAAACTGCCATTGTTGGAAACAGAGTTTCACTGATGCATGGTGTAACATTAGGAGGCACAGGTAAGGGAGTAGGTGATCGCCATCCCAAAGTAGGTGAAGGGGCACTAATTGGAGCTAGTGCAACTATACTTGGGAATATAAGAATAGGTGAAGGTGCTATGATAGCTGCTGGCTCCCTTGTGTTAAAAGATGTCCCTCCCCACAGCATTGCTGCAGGAATACCAGCAAAAGTTATTGGAGGTCTACAAGAGCAGGACCCATCTTTAACCATGAAGCATGATGCTACAAAACAATTTTATACCGACGTAGCTGCTAACTTCAGAGATGAAAAGCCCAGTGGTGCCCAGAATCCAGATAGAAATGAAGTTGAAAACTTGAGAGGCTCGATAGTGTAG 1104 0.5027 MACVSHHHHHHYRHRNSLALPNMLSGAAHHRRRLQNDAPEPDHHRPTLASAYRLEKVFPVYAMGAADPEPEPDLDGPDPIWDAVREEAKLEVEKEPILSSFLYASILAHDCLEQAVAFVAANRLQNPTLLATQLMDIFCNVIMHDKGIQRSIRLDVQAFKDRDPACLSYCSAILYTKGYHSLQVYRVAHALWHQGRKVLALALQSRVSEVFGVDIHPAAKIGEGILLDHGTGVVIGETAIVGNRVSLMHGVTLGGTGKGVGDRHPKVGEGALIGASATILGNIRIGEGAMIAAGSLVLKDVPPHSIAAGIPAKVIGGLQEQDPSLTMKHDATKQFYTDVAANFRDEKPSGAQNPDRNEVENLRGSIV* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0614 367 Gene3D Hexapeptide repeat proteins 214 342 - -
Lja2g0614 367 MobiDBLite consensus disorder prediction 345 367 - -
Lja2g0614 367 SUPERFAMILY Trimeric LpxA-like enzymes 79 328 IPR011004 -
Lja2g0614 367 TIGRFAM cysE: serine O-acetyltransferase 152 313 IPR005881 GO:0005737|GO:0006535|GO:0009001
Lja2g0614 367 CDD LbH_SAT 211 311 IPR045304 -
Lja2g0614 367 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 273 301 IPR018357 GO:0016740
Lja2g0614 367 Pfam Bacterial transferase hexapeptide (six repeats) 264 297 IPR001451 -
Lja2g0614 367 Pfam Serine acetyltransferase, N-terminal 80 183 IPR010493 GO:0005737|GO:0006535|GO:0009001
Lja2g0614 367 PANTHER SERINE ACETYLTRANSFERASE 2-RELATED 22 342 - -
Lja2g0614 367 SMART SATase_N_2_a 80 184 IPR010493 GO:0005737|GO:0006535|GO:0009001
Lja2g0614 367 PANTHER SERINE ACETYLTRANSFERASE 22 342 - -
Lja2g0614 367 Gene3D serine acetyltransferase, domain 1 66 213 IPR042122 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0614 Lja-Chr2 5504726 5510741 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0614 54 350 Miscellaneous Gene Families AT2G17640 73.579 5.48e-153 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0614 K00640 - gmx:100775449 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0614 2 5504726 5510741 Lja2g0614 2 5504726 5510741 ECH