Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0571 ATGGCTTCTTCTGCACCCACCACCCATTTCTCTCTTCCTCTCGGCTCCAAACAAGCAGCAACCACCTCTTCATCAACCGCAACCCCCAAATCCACCCACCTCTCTTTTGCACCTCCCCATGCTTTATCCTCCCACCCCAGAACCCATTTTCGGTTGAACCCCAAGTGGGGTTCTGTTTCAACCGCGTGTCCTGCTGTGAGGAGGTCAATGATATGCGCTAGTTCTTCCCAAGTTATGGATCCCTCTGCACCAATAATCGAACCTGGTGTTCCAGCCATTGTCGATGTCGATTTGGGTAATCGGAGCTACCCCATTTACATCGGATCCGGGTTGCTTCAAAAACCCGAGTTGCTCCAGAGGCATGTCCATGGGAAGAGGGTCCTCGTTGTCACTAATGAAACGGTTGCGCCACTGTATCTGGACAAAGTTATTGATGCCTTGACTAAGGGAAACCCGAATGTTTCTGTTGAGAGTGTGATATTGCCGGATGGGGAGCAGTACAAGAACATGGATACTCTTATGAAAGTCTTTGACAAGGCCATTGAGTCACGGCTGGACCGGCGATGTACATTTGTTGCCCTCGGAGGTGGTGTGATAGGTGATATGTGTGGCTTTGCTGCTGCTGCCTTCCTACGCGGTGTTAATTTCATTCAGATTCCTACCACTGTTATGGCACAGGTTGATTCTTCAGTTGGTGGCAAAACTGGGATAAACCATCGCCTTGGAAAGAACCTGATTGGTGCTTTTTACCAACCTCAGTGTGTGCTTATAGATACGGACACATTAAGTACATTACCAGAGAGGGAACTGGCATCAGGGTTTGGAGAAGTTATAAAGTATGGACTCATTAGGGATGCTGAATTTTTTGAGTGGCAAGAGAAAAATATGCAGGCATTGATGGCAAGAGATCCTAATGCACTGGCATATGCTATAAAGCGATCTTGTGAAAACAAGGCCGAGGTTGTGTCCTTGGATGAGAAGGAAAGTGGACTGAGGGCAACATTGAACTTGGGTCATACATTTGGTCATGCAATAGAAACAGGAGTTGGCTATGGGCAGTGGCTTCATGGAGAGGCTGTTGCAGCTGGCACGGTAATGGCTGCTGACATGTCATATCGCCTAGGTTGGATTGATGATTCTATTGTGAGACGAGTCAGAGACATTTTAATACAGGCCAAGTTACCTATTGCGCCTCCGGAAACAATGACTGTTGACATTTTTAAAAATGTCATGGCGGTTGATAAGAAGGTAGCAGATGGGTTGCTAAGGCTTATCCTTCTAAAGGGTCCTCTAGGCAATTGTGTTTTCACAGGGGATTATGACAGAAAGGCCCTAGATGATACACTTAATGCATTCTGTAAATCCTGA 1368 0.4686 MASSAPTTHFSLPLGSKQAATTSSSTATPKSTHLSFAPPHALSSHPRTHFRLNPKWGSVSTACPAVRRSMICASSSQVMDPSAPIIEPGVPAIVDVDLGNRSYPIYIGSGLLQKPELLQRHVHGKRVLVVTNETVAPLYLDKVIDALTKGNPNVSVESVILPDGEQYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGFAAAAFLRGVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVLIDTDTLSTLPERELASGFGEVIKYGLIRDAEFFEWQEKNMQALMARDPNALAYAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIETGVGYGQWLHGEAVAAGTVMAADMSYRLGWIDDSIVRRVRDILIQAKLPIAPPETMTVDIFKNVMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDDTLNAFCKS* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0571 455 CDD DHQS 102 449 - -
Lja2g0571 455 MobiDBLite consensus disorder prediction 1 48 - -
Lja2g0571 455 MobiDBLite consensus disorder prediction 1 33 - -
Lja2g0571 455 PANTHER 3-DEHYDROQUINATE SYNTHASE, CHLOROPLASTIC 91 451 - -
Lja2g0571 455 TIGRFAM aroB: 3-dehydroquinate synthase 103 444 IPR016037 GO:0003856|GO:0005737|GO:0009073
Lja2g0571 455 PANTHER 3-DEHYDROQUINATE SYNTHASE 91 451 - -
Lja2g0571 455 Hamap 3-dehydroquinate synthase [aroB]. 91 449 IPR016037 GO:0003856|GO:0005737|GO:0009073
Lja2g0571 455 Gene3D - 85 264 - -
Lja2g0571 455 SUPERFAMILY Dehydroquinate synthase-like 96 446 - -
Lja2g0571 455 Gene3D - 265 455 - -
Lja2g0571 455 Pfam 3-dehydroquinate synthase 159 417 IPR030960 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0571 K01735 - gmx:100806628 713.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0571 2 5138069 5142061 Lja2g0571 2 5138069 5142061 ECH