Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0567 ATGGGTTGCTGTCATTCCAGCATTGACAGGGAAGAAACGGTGTCGCATTGCAAGGCCAGGAAGCGTTACATGAAGCAGATGGTGCAAGCAAGGCACGCTTTTGCTGCAGCTCATGTCATGTACATTCGATCTCTCCGTGCAACTGGCTCTGCTCTGTTTCAGTTTGCAAATGCTGAAACTACCCTCCTCCGCCATAACCACCATCTCCCGCCGCCTCCGCCGAGAGCTCCGACCCCGATGCGACCTCCTCCGCCTCCGATGAGTCCGAGTTCGTATACATGGACATCTGGGACTGCTTCCCCTGCTCTTCCTCCCCCTCCGCCGCCGATGGCTTCCTCCGGTTGGGATTTCTGGGACCCGTTCATGCAGCCTCCGCCTCCGCCTTCTTCGAGGTCGGCGACAGAGGAGGAGTGGGAGGCGACTACCACAACTGGCTCTGAGGTGGTGGCTATGGGGAGAGGTGCGGCGGCGAATATGGTGGCTCCGGCGTCTGTGTCTGGAGGAGGGTTTTCCAAGGAGACCTCGAGTGAGCTTGCAGTGGTGGTGTCAAGGAACAACAAAGATCTTGTTGAGGTTATCAAAGAGCTTGATGATTACTTTCTCAAAGCTGCTGATGCTGGTGCTCAGGTCTCAATGCTCCTACAAGTTCCAACCTCTGGTTTTTCCGATCACAGTAAAGGAGGTAAAGTGTATGGCTATGGATGGAGCCTGAATCCATCTGTGTGGGCATGGGGTTCTAGTCCTAAACTGAATGGATTTGGCAAACTGGCAGAGACTTCTATTTCTGTTGGGAATTTTGGGGCTAATGGTGCTGGAAGTGGTGGCCACTGCTCCACTGTGGAGAGGCTCTATGCATGGGAGAAGAAATTGTACCAAGAGGTTAAGAGTGCTAAGACTGCAAAGATGGAGCATGAGAAGAAGGTAGCATTTTTAAGGAAGCTAGAGATGAAAAGAGCTGACTATGTGAAGACAGAGAAGACGAAGAAAGAAGTGGAGAAATTAGAATCACAAATGATGGTTGCTTCTCAGGCCATCGAAAGCACATCTGCTGAAATTGTTAAATTAAGGGAGATAGAGCTCTACCCTCAACTCATTGAGCTTGTGAAAGGATTGATGTGCATGTGGAGAAGCATGTATGAGTGTCATCAAGTCCAAAAACACATAGTTCAACAGCTGGAATACCTCAATACCATACCATCAAATAACCCCACTACTGAGATTCACAGGCAGTCAACTCTTCAGCTGGAGCTTGAAGTACAGCAATGGCACCATTCCTTTTGCAACCTCTTCAAGGCCCACCGGGACTACATCCAGTCTCTCACAGGCTGGCTAAGGCTCAGCCTTTTCCAGTTTAGCCGAAACCCTCTTAGCAAAACCTCAGAGGAGTCAAAGATATACTCTCTCTGCGAAGAATGGCACCTTGCTGTTGATCGTATTCCGGACAAGGTGGCATCTGAAGGAATTAAAAGCTTGCTGACAGTTATTCATGCCATTGTGGTTCAACAGACAGAGGAGCATAAACAAAAGAAGAGATCAGATTATGCATTTAAAGAGTTTGAGAAGAAGGTGGTACAGCTTCGATCCCTGGAGTGCAAGTATGGTCCTTACTCCGTGCCGGAAACCATAAGAAGAACCAAGGACCCTGTTGCTGAGAAACGTGCAAAGGTGGAAAGTTTGAGGGGAAAGGCAGAGGAAGAAAAGAGCAAATATGAGAAGTCAGTGAGTGTTACAAGGGCAATGACACTGAATAACCTTCAAATGGGTTGCCCGCATGTTTTTCAAGGGATTGTGGGGTTTTCAAGTGTGTGCATGGAGGTTTTTGAATCTGTATACAACAAAGCTAAAGCCACAGAACAGAACCATGATGTTAAGAGAATAATGCCATAG 1887 0.4844 MGCCHSSIDREETVSHCKARKRYMKQMVQARHAFAAAHVMYIRSLRATGSALFQFANAETTLLRHNHHLPPPPPRAPTPMRPPPPPMSPSSYTWTSGTASPALPPPPPPMASSGWDFWDPFMQPPPPPSSRSATEEEWEATTTTGSEVVAMGRGAAANMVAPASVSGGGFSKETSSELAVVVSRNNKDLVEVIKELDDYFLKAADAGAQVSMLLQVPTSGFSDHSKGGKVYGYGWSLNPSVWAWGSSPKLNGFGKLAETSISVGNFGANGAGSGGHCSTVERLYAWEKKLYQEVKSAKTAKMEHEKKVAFLRKLEMKRADYVKTEKTKKEVEKLESQMMVASQAIESTSAEIVKLREIELYPQLIELVKGLMCMWRSMYECHQVQKHIVQQLEYLNTIPSNNPTTEIHRQSTLQLELEVQQWHHSFCNLFKAHRDYIQSLTGWLRLSLFQFSRNPLSKTSEESKIYSLCEEWHLAVDRIPDKVASEGIKSLLTVIHAIVVQQTEEHKQKKRSDYAFKEFEKKVVQLRSLECKYGPYSVPETIRRTKDPVAEKRAKVESLRGKAEEEKSKYEKSVSVTRAMTLNNLQMGCPHVFQGIVGFSSVCMEVFESVYNKAKATEQNHDVKRIMP* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0567 628 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Lja2g0567 628 Coils Coil 324 351 - -
Lja2g0567 628 MobiDBLite consensus disorder prediction 67 90 - -
Lja2g0567 628 MobiDBLite consensus disorder prediction 66 109 - -
Lja2g0567 628 PANTHER UNCHARACTERIZED 1 613 - -
Lja2g0567 628 PANTHER SERINE HYDROXYMETHYLTRANSFERASE, PUTATIVE (DUF632)-RELATED 1 613 - -
Lja2g0567 628 Coils Coil 549 569 - -
Lja2g0567 628 Pfam Protein of unknown function (DUF632) 189 496 IPR006867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0567 Lja-Chr2 5122316 5125832 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0567 187 530 Acyl Lipid Metabolism Gene Families AT2G27090 28.084 1.99e-36 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0567 - - aprc:113869576 926.006
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0567 2 5122316 5125832 Lja2g0567 2 5122316 5125832 ECH