Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0549 ATGGCAGCAGATGAAGATATTTGCATGTCAGATTTGAAGTCTCAGCTGAGTCAATTACATGACACATGGAAGCAGGAAATTGAAAGAAGCCAATCCCAAATGGATTTATTGCAAGCAAAGCTTATGGAGGTAAAGGATTGCATACAGGGTTCAGATGGAGATGCAAAAAAGGAGTTGGAGGTTCTTTTGCGAAGAGTCAATACTTCTGCTACATTGTTGACATACTTAAAATCAAAAGCTAGACTCATGGCTGTTCCTCATCTAGCCCATACATCTTGTGGCATCAAACCATTAGAGGGGGTAGGCTTTGTCGACAAAAATGGGACGCCATTATCAGGTTGGTCCAGCGATGTTGAGCTTTCTTCATTTAATGACGCAGATGAAGAATCTTGGATAGGAATTAGCCGTCAGCATGGTTTCTTAGATGAACAGGATGCAGCTTATATAGGTGATGTACTCAAATCTGTAAACATGGTTGGAGATGTGATGGAAGTCCTTGTCAAAAGGGTTTTATTGGCAGAATCAGAAACTGCAGTGGAGAAGGAAAAAGCAAGTTTATGTCAGGAAGAAATTAAGCGGAAGTCTGCCCGGTTAGAGAATATGTCTATGAAATTAGAGGAGATGCAGCATTTTGTTTTGAGTACCAACAGTATTATAAATGAGATGCAGCAGAGAGTTGAGGATTTGGTTGAAGAGACAACCAGACAGAGCCAGCGAGCTGCTGAAAATGAAGAAGAGCTTTCTAGAGTGAAGCAGGAATTTGAGTCTCTGAAATCATATGTTAGCGGTCTAATCACAGTAAGAGAAACATTACTATCTTCAGAGAAGCAATTTCAAACTATTGAGAAGCTGTTTGAAAAGCTAGTTGCAAAGACTACTCAATTAGAGGGTGAGAAAATGCAGAAAGAGGCTGAAGTTCAGAAACTGATGGAAGAGAATGTGAAGTTGAATGCACAGCTTGACAAGAAAGAGGCTCAACTTTTGGCTTTGAATGAACAATGCAAAGTAATGGCCTTGAGCGCTTCAAACATGTAA 1035 0.4019 MAADEDICMSDLKSQLSQLHDTWKQEIERSQSQMDLLQAKLMEVKDCIQGSDGDAKKELEVLLRRVNTSATLLTYLKSKARLMAVPHLAHTSCGIKPLEGVGFVDKNGTPLSGWSSDVELSSFNDADEESWIGISRQHGFLDEQDAAYIGDVLKSVNMVGDVMEVLVKRVLLAESETAVEKEKASLCQEEIKRKSARLENMSMKLEEMQHFVLSTNSIINEMQQRVEDLVEETTRQSQRAAENEEELSRVKQEFESLKSYVSGLITVRETLLSSEKQFQTIEKLFEKLVAKTTQLEGEKMQKEAEVQKLMEENVKLNAQLDKKEAQLLALNEQCKVMALSASNM* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0549 344 Coils Coil 219 260 - -
Lja2g0549 344 Coils Coil 20 40 - -
Lja2g0549 344 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 1 342 IPR040225 GO:0009639|GO:0009959
Lja2g0549 344 Coils Coil 188 208 - -
Lja2g0549 344 Coils Coil 292 333 - -
Lja2g0549 344 PANTHER KINECTIN-LIKE PROTEIN 1 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0549 Lja-Chr2 4959741 4963283 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0549 - - gmx:100820457 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0549 2 4959741 4963283 Lja2g0549 2 4959741 4963283 ECH