Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0543 ATGGACCGCAAGGGTTGGCCCTGGAAGAAAAAATCATCTGATAAAATCTCAAAGGCTGAGAAGCCAGTGGATACACCTGAATCTGTTGGCTCTACCTTGTCTTCTGTGGCAAATCTAGGAGATCAGGAAAACTACAAAAATAAGAACTATGTTCAAATATCCATGGAATCATACACACACATTTCTGGATTGGAAGATCAAGTTTTAAACTTAGAGGATCAAGTAAAAAGTTTGGAAGCAAAGCTATCTGCAGCATGTTCGGAATTAAATACAAAGGAAAATCTAGTTAAACAGCATGCAAAAGTTGCTGAGGAAGCAGTCTCAGGTTGGGAGAAAGCTGATGCAGAAGTTGTTTCCTTAAGACGCGAACTAGAATCTATGACACTCTCAAAGCTTAGTGTTGATGAGAGAGCATCTCACTTAGATGGAGCGCTGAAAGAATGCACGAGGCAGATAAGAATTGTGAAGGAGGAAAGTGAGCAGAAACTGCAGGAAGTAGTTCTTTTGAAATCCCAGCAGTGGGAGAAAATCAAGTTAGAGCTCCAAGCACAGATAAACAAATTGGATAAAGGACTTCGTGAGGAAGCTTGTGAAAACGCTGCCCTTCTGAGATCACTTCAAGACAGTTCGAATAAACTAGTCAAACTAAAGGAAGAAAAGTCAGAAGCTGAGGCTGAGGTAGAGCTTCTAAAGAAGAATGTTCAATCATATGAAAAAGAAGTAACTTCATTGAAGTATGAGCTGCACGTAATGTCTAAGGAGCTGGATATCCGAAATGAAGAGAAGAGTATAATTATGAGATCTGCAGATGTGGCAAACAAACAACAGTTAGAGGATGTTAAGAACATTGCCAAACTAGAGGGTGAGTGCCAAAGACTTCGTGTTCTGTTGCGAAAGAAGTTACCTGGGCCTGCTGCATTGGCACAAATGAAGCTAGAGATTGAGAGTTCACACCATGTCATCAGTGGACCTCATCTAAGAAAAACTGGTAGCCTGCGAGAATCCAAGTTTCTTACCAAACAACTGGAGGTTTTGGAAGAAGAAACAAAAACATTGAAAAGAACTTTGGCCTCAAGTAATGCTGAGCTGCAGGCTTCTAGAAACTTATACGCGAAAACAGTTGGCATACTTAAGAGCTTAGAAGCAGAGATGCAGGTTCTTCACCAAGAAAGAAGTGCCCAGAAATCAGTTTTGGCAAACAATTATAGAAGTTCTAGCAATCTGCCAAGCATCACTTCTATCTCTGATAGTGGGCATAGGGATCCAGAAAATCCTGTTGAGTCACATGCAACCTCAAATTGTGACCATTCTGATACCGGTAGAGATAAAAGTTCAGGTAAATTGGATAATCACAAGAGTGAAACCTTCTCTGAACTGATGGACGACTTTCTGGAAGTGGAGAAAATGGCATGTTTACCAGACAATGGCAGTGTACTTATTGGCAAAGTCAATGACAATTCTGAAGTTAAGCAATCAGATGAGACTCCTAAAGCCAGAGAGACCAGCTGTTCTCCTAATCAAAATTGTTTTGACACTACAAAGCCGGAAATAGAGCCTGATTCTGACAATGATTATCTTACCATATTGAAGAGGCTTCAATCTTTAATTTCTATGGTCATTAATGCTAAAACAAAGGACTCCAATACTTGGATGTTTTTTGAGGATCTTCGAGGTACCTTGTCTGAATTGAGAGGTTACCTTCCACCAAATTCAGAATGCCCTCTCTGTTTGAAATCTAATCTCAATGATAGAGAATTGGATAGAGATGATTGTTTTACTCAACTCAGTTCAAATTTTGAGGTTCCCGGAGAAGTTAGTCCAGGTTCTGAGTTGAAAGATAAAACAGCTGAACATGATGAGTACTTGCAAGATCATGAGGAAAACATGCAGCTTATGGCAGAACTGAAAGCACAATTGGCATCATCTCAGGAATCACACAGCTTGGCTGAGATTCAGCTGAAATGCATGACAGAATCTTATAAGGCACTTCAAATACATGTAGAGGAGTTAGAAGCTGAAATTAAGTTTTTAAAGGAAAGGGTAGATGAACTAAAGAACAATCTTGCGGAGGAGAAACAATGTCATCATGATGCTTTAGTGAGGTACAAAGAAATTGAAGAGAAAATGCAAAGGTTAGATAAAGAGCTAGCAGCTGCAGAGAAAAAGCTAGCAGAATGTCAAGAGACTCTGCATGTACTTGCTAAGCAATTGCGAGCTATGTGTCCTCAAATAGGCGTAACGATGTCTCATCATAATAAAAGGCTTCAAATGAATGAAATGATAGCTAAACCAACTTGTGGGTGGTCAAATTCTTGCGGGTCCAGTAACTCAAATGAAATTGATCAGGCTGAGGCATCTAGCGCGTCTTCTGATTCTGACATTCAAGGAGTGATTGATGAGTTTTCGTCGCAGAATTTCGGGTCCATATCAGATACTGAAGGCAATTTTTCATTGAATTCTTCAATAGGCTCAAGCCATCCTGGTATTGAATCAAATTCCTATTCTTCTGCTTCTGCTAAAGGGAAGCATGCACAAGGTTTGAGCCACTTCTTTTCCTCAAAAGAGAAGATTAATCACTAG 2580 0.3988 MDRKGWPWKKKSSDKISKAEKPVDTPESVGSTLSSVANLGDQENYKNKNYVQISMESYTHISGLEDQVLNLEDQVKSLEAKLSAACSELNTKENLVKQHAKVAEEAVSGWEKADAEVVSLRRELESMTLSKLSVDERASHLDGALKECTRQIRIVKEESEQKLQEVVLLKSQQWEKIKLELQAQINKLDKGLREEACENAALLRSLQDSSNKLVKLKEEKSEAEAEVELLKKNVQSYEKEVTSLKYELHVMSKELDIRNEEKSIIMRSADVANKQQLEDVKNIAKLEGECQRLRVLLRKKLPGPAALAQMKLEIESSHHVISGPHLRKTGSLRESKFLTKQLEVLEEETKTLKRTLASSNAELQASRNLYAKTVGILKSLEAEMQVLHQERSAQKSVLANNYRSSSNLPSITSISDSGHRDPENPVESHATSNCDHSDTGRDKSSGKLDNHKSETFSELMDDFLEVEKMACLPDNGSVLIGKVNDNSEVKQSDETPKARETSCSPNQNCFDTTKPEIEPDSDNDYLTILKRLQSLISMVINAKTKDSNTWMFFEDLRGTLSELRGYLPPNSECPLCLKSNLNDRELDRDDCFTQLSSNFEVPGEVSPGSELKDKTAEHDEYLQDHEENMQLMAELKAQLASSQESHSLAEIQLKCMTESYKALQIHVEELEAEIKFLKERVDELKNNLAEEKQCHHDALVRYKEIEEKMQRLDKELAAAEKKLAECQETLHVLAKQLRAMCPQIGVTMSHHNKRLQMNEMIAKPTCGWSNSCGSSNSNEIDQAEASSASSDSDIQGVIDEFSSQNFGSISDTEGNFSLNSSIGSSHPGIESNSYSSASAKGKHAQGLSHFFSSKEKINH* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0543 859 MobiDBLite consensus disorder prediction 398 419 - -
Lja2g0543 859 Coils Coil 632 736 - -
Lja2g0543 859 Coils Coil 199 247 - -
Lja2g0543 859 MobiDBLite consensus disorder prediction 818 840 - -
Lja2g0543 859 Pfam Filament-like plant protein, long coiled-coil 610 743 IPR008587 -
Lja2g0543 859 Pfam Filament-like plant protein, long coiled-coil 92 589 IPR008587 -
Lja2g0543 859 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 523 - -
Lja2g0543 859 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 570 820 - -
Lja2g0543 859 Coils Coil 377 397 - -
Lja2g0543 859 MobiDBLite consensus disorder prediction 398 452 - -
Lja2g0543 859 PANTHER FILAMENT-PLANT-LIKE PROTEIN 1 523 - -
Lja2g0543 859 MobiDBLite consensus disorder prediction 1 31 - -
Lja2g0543 859 MobiDBLite consensus disorder prediction 483 506 - -
Lja2g0543 859 PANTHER FILAMENT-PLANT-LIKE PROTEIN 570 820 - -
Lja2g0543 859 Coils Coil 61 95 - -
Lja2g0543 859 MobiDBLite consensus disorder prediction 773 793 - -
Lja2g0543 859 Coils Coil 335 362 - -
Lja2g0543 859 MobiDBLite consensus disorder prediction 1 22 - -
Lja2g0543 859 MobiDBLite consensus disorder prediction 434 452 - -
Lja2g0543 859 Coils Coil 145 165 - -
Lja2g0543 859 Gene3D - 606 766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0543 Lja-Chr2 4892644 4896226 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0543 - - cam:101499544 848.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0543 2 4892644 4896226 Lja2g0543 2 4892644 4896226 ECH