Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0527 ATGGACGACATGAGACATGGATGCTTGGTGACGATGCTGTTACTGTTCCTGTCGACTGTGGCCGCTACACCTCATCGGCATCGCTTGTCTGAAACTGCCACCGACAGATATCTAACCAAGCAGGAACAGTGGTTCTCACAGACCCTCGACCACTACTCTCCCTATGATCACCGCAAGTTCCAGCAACGTTACTATGAGTTCCTTGACTATTTCCGGATTCCTGATGGACCCGTTTTTTTGGTAATCTGTGGTGAATATTCATGCAATGGGATAAGAAATGACTATATTGCTGTTCTGGCAAAGAAATTTGGAGCAGCTGTGGTTTCTCTTGAGCATCGCTATTATGGAAAGAGTTCTCCATTTAAATCTCTGGCCACAAAAAATCTAAGATATCTTTCATCCAAGCAGGCACTCTTTGATTTGGCTGTTTTTCGTCAGAATTATCAGGACTCCTTAAATGCAAAACTTAATAGAACAAAAACTGAAAATCCCTGGTTTGTTTTTGGTGTCTCATATCCTGGAGCACTCAGTGCGTGGTTCCGTCTGAAATTTCCCCATTTAACATGTGGAAGTCTTGCAAGTTCTGCTGTTGTTCTTGCTGTTTACAACTTCACAGAATTTGATCAGCAGATTGGTGAGTCAGCGGGTGCTGAATGTAAAGCAGCATTACAAGAAACCACTCAACTTATTGAGAAAAAACTGGCAACTGATGGAAAGGCATTGAAGGCTTCTTTCAATGCAGCTGATCTTGAAATTGATGGTGACTTCATGTATTTCTTGGCTGATGCTGGTATCACAGCGTTTCAATATGGAAATCCAGATATCTTATGCAAGCCTCTTGTTGAGGCAAAGAAGGATGGAGAGGATTTGGTGGATGCTTATGTCAAATATGTCAAAGAGAACTATGGTGAAAGTACAGAATCTTATGACCAAGAGAACTTGAAAAACACTTCGGTCAGTGAAAACAGTTCTGATAGACTTTGGTGGTTTCAAGTTTGCACTGAGGTTGCATACTTTCAGGTGGCTCCCTCAAATGATAGTATACGCTCCTCAATAGTCGACACAAGATACCATTTGGACCTTTGCAAAAATGTCTTTGGAAAGGGCATCTTTCCTGATGTTGGTGCAACTAATTTATATTATGGAGGCACAAAAATTGCTGGTTCCAGAATAGTATTTACAAATGGCTCACAGGATCCTTGGCGCCGTGCATCAAAACAAATCTCATCCCCTGAGATGCCTTCTTACACTATCACATGTCACAATTGTGGCCATGGAGTTGACATACGAGGATGTCCTCAAGATCCGTTTAACATCGAAGGTAATGAGAAGAAGTGCACATCTCCTGATGCAGTTCACAAAGTTAGGCAAAAGATCATAGAGCATATAGACTTATGGCTATCTCAGTGCGAGGACCCGGGCAGGAGTTGTATATGA 1437 0.4217 MDDMRHGCLVTMLLLFLSTVAATPHRHRLSETATDRYLTKQEQWFSQTLDHYSPYDHRKFQQRYYEFLDYFRIPDGPVFLVICGEYSCNGIRNDYIAVLAKKFGAAVVSLEHRYYGKSSPFKSLATKNLRYLSSKQALFDLAVFRQNYQDSLNAKLNRTKTENPWFVFGVSYPGALSAWFRLKFPHLTCGSLASSAVVLAVYNFTEFDQQIGESAGAECKAALQETTQLIEKKLATDGKALKASFNAADLEIDGDFMYFLADAGITAFQYGNPDILCKPLVEAKKDGEDLVDAYVKYVKENYGESTESYDQENLKNTSVSENSSDRLWWFQVCTEVAYFQVAPSNDSIRSSIVDTRYHLDLCKNVFGKGIFPDVGATNLYYGGTKIAGSRIVFTNGSQDPWRRASKQISSPEMPSYTITCHNCGHGVDIRGCPQDPFNIEGNEKKCTSPDAVHKVRQKIIEHIDLWLSQCEDPGRSCI* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0527 478 Gene3D alpha/beta hydrolase 39 275 IPR029058 -
Lja2g0527 478 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 9 473 - -
Lja2g0527 478 Pfam Serine carboxypeptidase S28 47 431 IPR008758 GO:0006508|GO:0008236
Lja2g0527 478 SUPERFAMILY alpha/beta-Hydrolases 46 206 IPR029058 -
Lja2g0527 478 Gene3D alpha/beta hydrolase 289 471 IPR029058 -
Lja2g0527 478 PANTHER OS10G0511600 PROTEIN 9 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0527 Lja-Chr2 4760354 4766682 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0527 - - pvy:116133947 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0527 2 4760354 4766682 Lja2g0527 2 4760354 4766682 ECH