Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0491 ATGGATGTGGCACAAGTACTGCACATGAATGGAGGCTCTGGAGACACAAGCTATGCAAAAAACTCCTTACCTCAGCAAAAGGCGATTTCATTGACAAAGGCAATGAGAGAGGAAGCCCTAACCAGCCTCTACCTTAAGAAAGCCCCAAGAATCTTATCAATTGCAGACTTGGGTTGCTCTTCTGGACCAAACACTTTGATGGTGCTATCTGAACTTGTCAAAACGGTGGAGAATCTTTGCCGGAAAATGAAGCATAAATCTCCTGAATACCAGTTCTTCATGAATGATCTTCCCGTGAATGACTTCAACAACATCTTTAAGTCCCTTGATAGCTACAAAGAGAAGCTAAGTGATGAATTAGGAGCTGAGATTGGTCCATGCTTTTTCACTGGAGTTCCAGGTTCCTTTTATGGCAGGATCTTTCCGACCAAAACTTTGCATTTTGTCCATTCCTCTTACAGCCTTCAATGGCTATCTCGGGTTCCTCGAGGTGTAGAGAATAATAAGGGCAACATTTACATGGCTTGCACAAGCCCCTCAAGCGTCCTCAAGGCTTACTACGAACAGTTTCAAAAAGATTTCTCATTATTTCTAAAGTTTCGTGCAGAAGAGCTCGTTGAAGGAGGTTGTATGGTTCTAACGTTTTTGGGAAGAAAAAGTGAAGAGCGATATAGCAAAGAATGTTGTTATATTTGGGGGCTTCTGGCTTTAGCTCTTAATGACATGGTCTCAGAGGGGAAAATAAATGAAGAGCAGCTAGACACATTCAACATCCCTCAATACACCCCATCTCCATCTGAGGTGAAGCTAGAGGTTCTCAAAGAAGGTTCATTCACCATTACTTGCCTGGAGGTGTCTAGAGTACATTGGAATGGTCATGATGATGATGATGACTGGAATAACGCTTTTGATTCCGAATCTCTCAATAACGTTGCAGGATACAATGTTGCAAAGTTCATGAGGGCCGTGGCTGAACCTTTGTTGATAAGTCACTTTGGAGAAGCTGTTGACATTGAAGAGGTTTTCCGCCGGTACCAAGCAATCCTTACTGATCGAATGTCTAAGGAGAGAACTGAGTTCATTAATGTTACCATATCAATGACCAGAAAAGACTAA 1116 0.4229 MDVAQVLHMNGGSGDTSYAKNSLPQQKAISLTKAMREEALTSLYLKKAPRILSIADLGCSSGPNTLMVLSELVKTVENLCRKMKHKSPEYQFFMNDLPVNDFNNIFKSLDSYKEKLSDELGAEIGPCFFTGVPGSFYGRIFPTKTLHFVHSSYSLQWLSRVPRGVENNKGNIYMACTSPSSVLKAYYEQFQKDFSLFLKFRAEELVEGGCMVLTFLGRKSEERYSKECCYIWGLLALALNDMVSEGKINEEQLDTFNIPQYTPSPSEVKLEVLKEGSFTITCLEVSRVHWNGHDDDDDWNNAFDSESLNNVAGYNVAKFMRAVAEPLLISHFGEAVDIEEVFRRYQAILTDRMSKERTEFINVTISMTRKD* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0491 371 PANTHER SAM DEPENDENT CARBOXYL METHYLTRANSFERASE-RELATED 1 369 - -
Lja2g0491 371 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 370 IPR029063 -
Lja2g0491 371 Gene3D Vaccinia Virus protein VP39 21 357 IPR029063 -
Lja2g0491 371 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 1 369 IPR005299 GO:0008168
Lja2g0491 371 Gene3D - 6 356 IPR042086 -
Lja2g0491 371 Pfam SAM dependent carboxyl methyltransferase 39 369 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0491 Lja-Chr2 4451746 4454874 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0491 K21483 - gmx:100815647 545.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0491 2 4451746 4454874 Lja2g0491 2 4451746 4454874 ECH