Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0488 ATGGCGGCAACAACCGCAATTTGCTTCCATCCCTCTTCTATCCTTCACCGACCAGTTTTGCTTAAACAAAGATACTTGAAAAAAAACACTACTTTATTTGCTTCTGCTCGTAGTCATAGCTTTTCTGCTTCAAGATCATTCCTTTCTGGCGAGTTTGTTCCAAAGAAACTCTCTTTAGGAAGAAACACAAACTGGGTATCAAGCCCCATGAATGCTTCTGCTTCCAGAGATGGAGGGAATAGCGATGAAAACATTCAAGTGTTTGAACAAGAAGCTTTAATTGATGCTGGCTCATCCAAGTTTTTATCTCAGGATATGGAATACAAGCTCAATAGATTGAGCAAGTGGATAGTAGCTGCCCTCTTTGCTGGTTTAATTCTTTGGAGGCATGATGTAGAAGCCTTATGGTTTGGAGCTGGATCTGTTTTAAATGCTGTACTTTCAGTTTGGCTCAAACGTATACTAAACCAGGAACGGCCCTCAACCGTAAAATCTGACCCAGGGATGCCGTCTTCACACGCACAATCAATATTCTTTACTGTCATCTTCGTCATTTTGTCAAGTATAGAATGGCTTGGGCTAAATGGATTCACCATTGCTATCAGCGGATTGGTCTTGGCATTTGGTTCTTTTTTTTCGTACCTAAGGGTGTCGCAACAACTTCATACAACAAGTCAAGTGCTTGTAGGAGGTGCTATTGGATCCATTTACTCTATTTTGTGGTATTGGCTATGGAAACATTTTGTGCTGGATGCATTTATAGCTTCTCTGTGGGTTAGAATCATTGTTGTTTTGGGCTCTGCAGGACTTTGCTTAGGTTTTGTTATATTTGCATTTCGTCATTGGCTTCGAAACGAATAA 861 0.4065 MAATTAICFHPSSILHRPVLLKQRYLKKNTTLFASARSHSFSASRSFLSGEFVPKKLSLGRNTNWVSSPMNASASRDGGNSDENIQVFEQEALIDAGSSKFLSQDMEYKLNRLSKWIVAALFAGLILWRHDVEALWFGAGSVLNAVLSVWLKRILNQERPSTVKSDPGMPSSHAQSIFFTVIFVILSSIEWLGLNGFTIAISGLVLAFGSFFSYLRVSQQLHTTSQVLVGGAIGSIYSILWYWLWKHFVLDAFIASLWVRIIVVLGSAGLCLGFVIFAFRHWLRNE* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0488 286 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 116 250 IPR036938 -
Lja2g0488 286 PANTHER PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1 73 285 - -
Lja2g0488 286 SMART acid_phosph_2 132 242 IPR000326 -
Lja2g0488 286 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 162 256 - -
Lja2g0488 286 PANTHER LIPID PHOSPHATE PHOSPHATASE EPSILON 1, CHLOROPLASTIC 73 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0488 Lja-Chr2 4419797 4423003 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0488 - - gmx:100784545 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0488 2 4419797 4423003 Lja2g0488 2 4419797 4423003 ECH