Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0484 ATGGAAAGAGTAACCCATTCTCGTCGACCAAGCAAGGCCGCCGTCACACTTTCCAACAACAGTGCTACCTTCTCCGGTACTAGCCTCTACGACGACGTCTACGGTGGCCCACCGAAGTTTGGCGCCTCAAACCTCTCGCCTCGGTTGGAAGACTACGCTGAGATTTTCGGAAGCTTCCGCACCCCACGCGTCTCCTCTGTTCCGGTGCTGGATCTTCCGCTGGTTCACGAGGCCGAGGCTTTCTTCGATCCTCGAAGTGACGATTTCGACTACACAGAAGTTTTCGGTGCCCTAGATTTTGCGGTTCCGCATGAGAACTTGTTTCATCAACCTGGTGCTCTGAACGGTGATTCCTCCGAAGAAGCCTGGACTCCGGCAGAAACTGATTCGTTCTCTGGAGAGTCGGACCATTACGAAAATAATCAAAGCTTTTCAAATGGTGATTTTTTCCAGTCCGTTGATGGTAATACGGAGTTCAACATTTCGTATCATAAGGTCAATGTTACAGGCAATGACCATATGTTGAAGAGGAAAACTCACATGACTGAGCTGCATGCTGTTCCTGGTTTCAGTCATGTACATGATGAAACCACAAGATTGCATAGGACTGGTCCATCTTTTGAGGTGGCCGATGATATTGATCTTGGTATAGGATTTAGTGCAGACAAGGTGAAGGGAAACCACATGAGGAAATCAATGCCGCATATGTGTAATTTTACCTCTGGGGAACAGAATTTTGGTAGTGATCTAAATCTTCAGAATGAGTTCATCAGAAATGATTCTCATTCCAGTGAGGCGTTCATTACTGTATCTGGCATCAGCCTCAAAAGTATTCCATCCCAAGCGCCAGCACCCTCACGTCCACCTCCTGTTGAGAAAAAGGGGGACATCAATGGATTTCATTCAAACAGCACGCTGGATGCTTCTGAAGAGAAAAGTAGAGGTTACTGTTCACCTCCTTTTTTGGATGTAGAGTTTGGTATGAATTCATCTGGCGCAGCTTCTGATGATGCTTTGAAAGAAGCAATGCGTAGAGCTGAAGCTAAGCTTAGGAGTGCTAAAGAATCTAAGAAGGGGACAAAGGGGGTTTATGAAAGCCATGTAAAATCAAGTTATGTTGTAAAAAACAATGGACCAAAGTCGACTGAGGATATGTCTAGATTAAATAGTTTGAATGATGAGACAATGCAGGAAAGTTTTGATAGAAGACATTCCAAAATGAAAACTTCTGTCAAAGATGAAAGGCAGAAACCTAGGAAGGCTTTCCCAAAAGCTCTGGACACTTTGGAAGGGGAAAGAGTTTTAAACATGTTTGAGGACAAGCACACCAAGCAATCCTGGTCATCTCAAGAATCAGATAAGAGAACTGGAGCTCGGATATGGAAAGAAGAACCTGAATTTTTTGAATTGGAGGGAACAAAAGATCCTGGAATGGTAACTCAGCATACAGAGCAGACTAAGATTTTGGTGCAAGATACTGGAAACCAAGAGCATATCTGGATGGAAAGAGAAGCATCTGATATGCAAGAAAACAATAAAAAAGTAAAAGCTATTAAAGAAAATTACCAGTGGGAGGAATATGATAAAAAACCCAAAGCTGCAAAAGCGGCTTATGAACATGACAAAAACATTATGAGATCTGAAGCATCTGATGAGAAATGGAGGCAAAGAGAGCATGTGAAGAAGGAAAATGTGGCTAAAATGTTTGAGCTGGAGAAGAATGTAACAATAGGCCACCAGCATGGAAAAATTGAAGAGAAAGCAACTGAAGCTGACCAATCAGGAAGCGTAGAATTAGAAGATGTACCTGATGTGGAACACACGGAGCATAAGCAAGTGAAAATCCAGAAACCTAAAGAGGTTCATAGACAAACACCAAATGAAGATCCGTTGAGCATGAGCCTTAAGGAAAACGAGAAGAAACCAAAAGAGGTTGTAAAGCTACAGCAGAATGTGAAAAAGCACAAGCTGTCTGTGAAAATGAAAGAAAGTGGAAAGCCACGCAGTGAAGCATTTGCTCTAGGACAAACTAAGGATGAGGAAAAACTGGAAGATTTTGTGGAGCTGGAAGACATTGAAAGACCAAAGGAAGAATTTAAGCAGAGTCACACAGGTGAAAGTGTGGCTGGCAGAGTAGAAAATGAAATAAGGTTTAAACTAACTAACCAAATTCTGAACAAGAAAGGGCTGAAAGAAGCTCTTGAAAGAGTAGAAACTGAGAAAAGCTTCCAAGGTTCTTTTGAAAAAGAGGAAAGTAATGAGGGCCTAAGACATGCTTTTGAGTGGGATGATAATGAAAAGAAACACAAAGGAGACTTTCAACTGGATGTGAATGAGATAAGACTGAAAGAGGCTTTTAAGCAGAGGGTAAATAATGAGATGGAAAATGAGGTATATGAAAGAGGTCAAAATAGAAAGAATTTTGAAGAAGCCTGTCATGGATATGGAGAAGGAAGAAGACTTACAGAAGCTGCTAAAAACACAGGGGCTCAGAAAGTTCTGAGTGAAGCTCCAGAGAAAGAACAAAAAGATGAAGTGGTAATTGGGGATCAAAGGAAAAGAGAAATTGAGATCATGTTAAATGAAACATTTATAAGGGAAGGAAGTACAACTTTATCAAACAAGAATAGTCTCCCAAAGCAATTCGAGAATATGGGCATAGATGTTGGGAGAATGGAAAAATATGAGGGTCCGGATAAAGCTTTGGACAAAATGGAAGGGAATGAAGGAGAAAATGTGAATTTTACTGAAGCAACTGATGAAACATGGGAAACAGAGAGTGATGAAGAACTTTTTGAGTCAGCCTCCACTCATGATGAAAATGTTTCTAGACCGGAGGTATCCCAAGAATCTGTTGCTGGCCAAGAAGTTGGAAAAACAAGAACTGGTTGCGGAGTCAGAGAAAAGAATCTGGAAGGGATAGGGATAGAAAATCCACCGGCTAAAGAGAAAATCAGAGCACCTGAAATGGTCCCCGGAGACACGGAGCATTCAGGGACCCAATCAGGAAAGGTGGATGACACTGTGGCAGAAGCTGACTATAGAAGAAGCACAAAAGCAGCTGAACCTACTACTGTGAAGGAATCTGTAAATGTCCTGAAAACTGCTGAATGTTCTCATGCTGGTCAATCCACAGAAAGAAAAGAAAAGAGTTTTAATGAAACTACTTTGGTGAATAATGCTGAAAGGATGAGAAGAGAAAGTGAGTCAGAAAAAGATTATCTTAGAAAGATAGAAGGGGAGAGAGATAGAGAAAGGGAAAGAGAAAAGGACAGAATGGCTGTTGAGAAAGCGAGGCTGGATGCTGAGAGGGAAAGGGAAAGAAAAAAGGATAGGAAGGCTGTAGATAGAGCAATTTTTGAGGCTCGTGACCGGGCATATGCTGAAGCTTGTGAGAGAGCAGAAAGGGCTGCCTTTGAAAGGGCAACTGCAGAAGTTCAGCAAAGAGCACTGGCTGAGGCCAAGGAAAGACTTGAGAAAGCATGCGCTGAGGCCAGGGATAAGTCATATCTTGATAAGGTAACAATAGAAGCCAGACTGAAAGCAGAACGCGCTGCTGTAGAAAAGGAAACTGTAGAGGCTCAAGAGCGTGCCAAGGAAAAATTAAAGGATGAGAAGGCTACATTGGAGTCCAGAGAACGTTTAGAGAGATCAGTATCTGACACCCTTGGTTTTTGTTCCAGAGAAGGTGCAAGGCTAGACTCTTCACTCTCTGACTTAAGCTCTTCTGAGGGTTGCAGATATCCATATTCACTTTATGGTGCTGCTTCTTTTTCTGAGAGATCAGAAAGAGAAGGTGAATCAGCTCAGAGGTGTAGAGCTAGACTGGAGAGGCATCGCCGAACAGCTGAGCGTGCAGCTAAAGCTTTGGCGGAAAAAAATATGCGTGACCTTGTAGCTCAGAAAGAGCAAGCTGAGAGAAACAGATTAGCAGAGTCTCTGGATGCTGAAGTAAGGAGGTGGTCAGGTGGAAAAGAAGGAAATTTGCGTGCATTACTTTCTACCTTGCAATATATCCTTGGGCCTGATTCTGGGTGGCACTCAATCCCATTGACAGACGTCATCACTGCTGTTGGTGTGAAAAAAGCTTACAGGAAAGCCACTTTGGTTGTCCATCCTGACAAATTACAGCAACGTGGAGCAAGTATTCAACACAAATACATATGTGAAAAGGTCTTCGATCTTTTGAAGGAAGCGTGGAACAAATTCAACTCAGAGGAGCGATAG 4227 0.4256 MERVTHSRRPSKAAVTLSNNSATFSGTSLYDDVYGGPPKFGASNLSPRLEDYAEIFGSFRTPRVSSVPVLDLPLVHEAEAFFDPRSDDFDYTEVFGALDFAVPHENLFHQPGALNGDSSEEAWTPAETDSFSGESDHYENNQSFSNGDFFQSVDGNTEFNISYHKVNVTGNDHMLKRKTHMTELHAVPGFSHVHDETTRLHRTGPSFEVADDIDLGIGFSADKVKGNHMRKSMPHMCNFTSGEQNFGSDLNLQNEFIRNDSHSSEAFITVSGISLKSIPSQAPAPSRPPPVEKKGDINGFHSNSTLDASEEKSRGYCSPPFLDVEFGMNSSGAASDDALKEAMRRAEAKLRSAKESKKGTKGVYESHVKSSYVVKNNGPKSTEDMSRLNSLNDETMQESFDRRHSKMKTSVKDERQKPRKAFPKALDTLEGERVLNMFEDKHTKQSWSSQESDKRTGARIWKEEPEFFELEGTKDPGMVTQHTEQTKILVQDTGNQEHIWMEREASDMQENNKKVKAIKENYQWEEYDKKPKAAKAAYEHDKNIMRSEASDEKWRQREHVKKENVAKMFELEKNVTIGHQHGKIEEKATEADQSGSVELEDVPDVEHTEHKQVKIQKPKEVHRQTPNEDPLSMSLKENEKKPKEVVKLQQNVKKHKLSVKMKESGKPRSEAFALGQTKDEEKLEDFVELEDIERPKEEFKQSHTGESVAGRVENEIRFKLTNQILNKKGLKEALERVETEKSFQGSFEKEESNEGLRHAFEWDDNEKKHKGDFQLDVNEIRLKEAFKQRVNNEMENEVYERGQNRKNFEEACHGYGEGRRLTEAAKNTGAQKVLSEAPEKEQKDEVVIGDQRKREIEIMLNETFIREGSTTLSNKNSLPKQFENMGIDVGRMEKYEGPDKALDKMEGNEGENVNFTEATDETWETESDEELFESASTHDENVSRPEVSQESVAGQEVGKTRTGCGVREKNLEGIGIENPPAKEKIRAPEMVPGDTEHSGTQSGKVDDTVAEADYRRSTKAAEPTTVKESVNVLKTAECSHAGQSTERKEKSFNETTLVNNAERMRRESESEKDYLRKIEGERDREREREKDRMAVEKARLDAERERERKKDRKAVDRAIFEARDRAYAEACERAERAAFERATAEVQQRALAEAKERLEKACAEARDKSYLDKVTIEARLKAERAAVEKETVEAQERAKEKLKDEKATLESRERLERSVSDTLGFCSREGARLDSSLSDLSSSEGCRYPYSLYGAASFSERSEREGESAQRCRARLERHRRTAERAAKALAEKNMRDLVAQKEQAERNRLAESLDAEVRRWSGGKEGNLRALLSTLQYILGPDSGWHSIPLTDVITAVGVKKAYRKATLVVHPDKLQQRGASIQHKYICEKVFDLLKEAWNKFNSEER* 1409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0484 1408 ProSiteProfiles dnaJ domain profile. 1344 1408 IPR001623 -
Lja2g0484 1408 MobiDBLite consensus disorder prediction 1023 1040 - -
Lja2g0484 1408 MobiDBLite consensus disorder prediction 374 395 - -
Lja2g0484 1408 MobiDBLite consensus disorder prediction 633 677 - -
Lja2g0484 1408 MobiDBLite consensus disorder prediction 577 626 - -
Lja2g0484 1408 CDD DnaJ 1360 1401 IPR001623 -
Lja2g0484 1408 MobiDBLite consensus disorder prediction 121 138 - -
Lja2g0484 1408 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 14 1098 - -
Lja2g0484 1408 MobiDBLite consensus disorder prediction 931 945 - -
Lja2g0484 1408 Coils Coil 1141 1168 - -
Lja2g0484 1408 PANTHER AUXILIN, ISOFORM A 1101 1403 - -
Lja2g0484 1408 MobiDBLite consensus disorder prediction 538 558 - -
Lja2g0484 1408 Coils Coil 1177 1215 - -
Lja2g0484 1408 MobiDBLite consensus disorder prediction 1060 1113 - -
Lja2g0484 1408 SUPERFAMILY Chaperone J-domain 1249 1407 IPR036869 -
Lja2g0484 1408 MobiDBLite consensus disorder prediction 112 138 - -
Lja2g0484 1408 MobiDBLite consensus disorder prediction 396 418 - -
Lja2g0484 1408 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 1101 1403 - -
Lja2g0484 1408 Coils Coil 720 740 - -
Lja2g0484 1408 MobiDBLite consensus disorder prediction 577 677 - -
Lja2g0484 1408 Coils Coil 501 521 - -
Lja2g0484 1408 MobiDBLite consensus disorder prediction 1008 1022 - -
Lja2g0484 1408 Gene3D DnaJ domain 1282 1408 IPR036869 -
Lja2g0484 1408 Coils Coil 1086 1112 - -
Lja2g0484 1408 Coils Coil 1269 1308 - -
Lja2g0484 1408 MobiDBLite consensus disorder prediction 277 314 - -
Lja2g0484 1408 MobiDBLite consensus disorder prediction 374 418 - -
Lja2g0484 1408 MobiDBLite consensus disorder prediction 899 1113 - -
Lja2g0484 1408 Coils Coil 336 356 - -
Lja2g0484 1408 PANTHER AUXILIN, ISOFORM A 14 1098 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0484 Lja-Chr2 4395532 4401753 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0484 - - gmx:100817245 1523.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0484 2 4395532 4401753 Lja2g0484 2 4395532 4401753 ECH
Lja2g0484 2 4395532 4401753 Lja4g3212 4 60657616 60664006 ECH