Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0483 ATGGGAACTTTGGGCAGAGCTTTCTACAGCGTCGGATTCTGGATCCGCGAAACCGGCCAAGCCCTCGATCGCCTCGGCTCCCGTCTCCAAGGAAACTACTTCTTCCAAGAACAACTGTCCAGGCATCGACCTCTCATGAATGTGTTCGACAAAGCTCCCCATGTTCATAGGGATGCATTTGTGGCTCCCAGTGCCTCCCTCGTTGGCGATGTTCAGATTGGCCAAGCTTCCTCCATTTGGTACGGTTGTGTTCTCAGAGGTGATGTTAACAGCATTATTATTGGATCTTCAACTAATATACAAGACAATTCTCTTGTTCATGTTGCTAAGTCTAATTTGAGTGGAAAGGTATTACCTACTATCATCGGAGATAATGTCACTGTAGGACATAGTGCTGTGTTACAAGGATGTACTGTTGAAGATGAAGCATTTATTGGCATGGGTGCCACATTGCTTGACGGAGTATATGTTGAGAAACATGCCATGGTTGCTGCTGGAGCTCTGGTCAGGCAGAATACAAGAATCCCCTATGGAGAGGTTTGGGGAGGTAATCCGGCAAGGTTCTTAAGGAAGCTCACAGAAGATGAAATGACCTTCTTCTCACAATCTGCCATAAATTATTCCAACTTGGCTCAGGCTCATGCTGCTGAAAATGCAAAAGAACTCGAGGAGGCAGAATTTGTAAAAGTTCTACACAAGAAGTCTGTTCGTCCTGGTGATGAGTATGCTTCAGCGCTAGGTGTTGTTCGGGAAACATCTCCAGAGCTTAACCTTCCTGATAATGTCGTGCTAGACAAAGTTCCAAAGGCTACTTAA 816 0.4571 MGTLGRAFYSVGFWIRETGQALDRLGSRLQGNYFFQEQLSRHRPLMNVFDKAPHVHRDAFVAPSASLVGDVQIGQASSIWYGCVLRGDVNSIIIGSSTNIQDNSLVHVAKSNLSGKVLPTIIGDNVTVGHSAVLQGCTVEDEAFIGMGATLLDGVYVEKHAMVAAGALVRQNTRIPYGEVWGGNPARFLRKLTEDEMTFFSQSAINYSNLAQAHAAENAKELEEAEFVKVLHKKSVRPGDEYASALGVVRETSPELNLPDNVVLDKVPKAT* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0483 271 CDD LbH_gamma_CA_like 55 212 - -
Lja2g0483 271 SUPERFAMILY Trimeric LpxA-like enzymes 45 212 IPR011004 -
Lja2g0483 271 Pfam Hexapeptide repeat of succinyl-transferase 119 151 IPR001451 -
Lja2g0483 271 Gene3D Hexapeptide repeat proteins 44 223 - -
Lja2g0483 271 PANTHER YRDA, PUTATIVE-RELATED 1 270 - -
Lja2g0483 271 PANTHER DYNACTIN SUBUNIT P25 1 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0483 Lja-Chr2 4389842 4392773 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0483 K01726 - gmx:100794184 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0483 2 4389842 4392773 Lja2g0483 2 4389842 4392773 ECH