Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0481 ATGTCTAAGTCTAACCATCAAGAATCAAGTGCTGCATGGAATGCCAATTACCCTCACCCTAAGCTCAATGAAAGAATTCTTTCTTCCCTTTCACGCAGAACTGTTGCTGCTCACCCCTGGCATGACCTAGAGATTGGACCAGGAGCTCCTTCAGTTTTCAACTGTGTTGTTGAAATTAGCAAAGGTGGTAAGGTTAAGTATGAGCTGGATAAGACCAGTGGACTTATTAAGGTTGACCGTGTTCTTTACTCATCAGTTGTGTACCCACACAACTATGGTTTTATCCCACGAACCATCTGTGAGGACAGTGATCCGATGGACGTTCTGGTTTTGATGCAGGAGCCTGTGCTACCTGCCTCCTTCCTTCGAGCCCGTGCTATTGGACTAATGCCTATGATTGACCAGGGTGAGAAGGATGACAAGATCATTGCAGTTTGTGCTGATGACCCTGAGTTCCGCCATTACACGGACATCAAGGAACTTCCTCCACATCGACTAGCTGAGATCAGAAGATTCTTTGAGGACTACAAGAAGAATGAGAACAAAAAAGTTGATGTGGAAGACTTTCTACCAGCTGAAGCTGCCGTTGAGGCCATCAAGTACTCCATGGACCTGTATGCTGCTTACATTGTTGAGAGCTTAAGGCAGTGA 651 0.4578 MSKSNHQESSAAWNANYPHPKLNERILSSLSRRTVAAHPWHDLEIGPGAPSVFNCVVEISKGGKVKYELDKTSGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPASFLRARAIGLMPMIDQGEKDDKIIAVCADDPEFRHYTDIKELPPHRLAEIRRFFEDYKKNENKKVDVEDFLPAEAAVEAIKYSMDLYAAYIVESLRQ* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0481 216 CDD pyrophosphatase 52 204 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lja2g0481 216 ProSitePatterns Inorganic pyrophosphatase signature. 102 108 - -
Lja2g0481 216 Pfam Inorganic pyrophosphatase 55 206 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lja2g0481 216 PANTHER BNAC07G03580D PROTEIN 6 210 - -
Lja2g0481 216 SUPERFAMILY Inorganic pyrophosphatase 33 211 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lja2g0481 216 PANTHER INORGANIC PYROPHOSPHATASE 6 210 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lja2g0481 216 Hamap Inorganic pyrophosphatase [ppa]. 51 207 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lja2g0481 216 Gene3D Inorganic pyrophosphatase 34 212 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0481 Lja-Chr2 4371753 4375052 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0481 K01507 - gmx:100306258 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0481 2 4371753 4375052 Lja2g0481 2 4371753 4375052 ECH