Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0474 ATGGAAGCTCATCTCAGAATCTTCAACCCCTCCATTTTGGGTCGCCGCTTACTCCCCAAAGCTACTCCATACCCTTCCACTTCCTACCAACTCGTCCCTCGCAGGAGGATACTACCCATCTCCTCCACTCTCTCCCGCTCTTCGCAACCACCGTTTCCTCCAATTTCGGATCCCCGCAGGTTCTTCTCCTCCCTCACCTCTTCCCAGAATCTCAACTTTTCCATCCCCAACGGAAATAATCTCAACCCCTTCCATTCCCATTCCCAAGGTGGCGGCGAGACCGTGTGGAACCCGGCTTCGGAGAACGGCGGCGATGTGGGGTTTTACGGAGGCAAAGACCGGGTTGCCACGGTGGTTCTGCTGGGGTGGCTTGGAGCGCAGACCAAGCACCTCAAGAGGTACGTGGAGTGGTACAATTCGAGGGGCTTTCACGCTGTCACATTCATCGTTGATGTGAAGGAGCTGCTTCGATTTGACCTTGGCGACATGCTTGAGCAGAGAATTTCTATGTTCGCCGACAACCTCATTTCCTGGGTTTCTAGCGAGGAACACGATGGGAGAGAACGGTGTTTGATTTTTCACACTTTCAGCAATACGGGTTGGTTTACCTATGGTTCCATTCTTGCCAGAATGCTAGGTAGCCAGGACCTCATGGAGAAGATTAAAGGATGCATTGTTGATTCTGGAGGGGGAGAGCCTTTTAATCCACAGGTCTGGGCTGCTGGTTTCTCTGCAGCTATATTGAAGAAACGCAGCTCTTCAGCCCAAGCTGCAGTCGAGGTAGGAAACAAGCTTGAAAAAGAGACTGAAATCAACTTGTCAAAGATTCAACAAAATGAACCTTCCCCAATTGAAACAGTGGTCTTGTCACTATTAGAGAAGTTGTTTTCATTTGGTTTGCAGTTGCCGGATGTTAAGCAGAGATTAACGAAGGTTGTGAATGTCCTCTTAGATCACCAGCCTTGCCCGCAGCTCTACCTGTATAGTACAGGTGACAAAGTAGTCCCATTTCAATCAATAGAAGCGTTCATTGCGGAGCAGAGGAAGAGAGGAAAGAGGGTAAGATCCTTTAATTTTGGCTCATCTCCTCATGTGGATCACTACAGGACATTCCCGGAGATATATTTATCACAGCTTACTGAGTTCTTGAACGAGTGTGAACCCACTTCATCTCGAAATCTGCAACCCAAAGTTTCTGTTCAGAACCATCTCACCATATCCCCAAATTTGAAACCCCACCACCATTCCCAAACCCCAGATCGGAGAGAAAAAAGAGAGGAAGAGATCGAGAGTTTTCCCCAAAACTACAGTGTTTGGGTTTGCCTCTTTGCCGAAGCTGAAGCCCAAGCCGTCGACCACAATATATACCCACCCCACCCCACCCCACCCCACCCCACCCCCACGCAATCCTTGTTCTGTTCCCACTTGTCATCAAACACCTACCACCACCTTCCACTTCACAATATTATGGCGGTTAACGATGATCCCATGGTGGTTCCCACCCTCTCTCCGCCCAACACCTACGAAGCTGTTGTTAACGGCGGCACCTTTGACCGATTGCACGACGGCCACCGCCTCTTCCTCACCGCTTCAGCGCAGTTGGCCAGGCGTCGGATTGTGATTGGAGTTTGTGACGGCCCTATGCTTGCAAAGAAGCAGTTTGCTGAACTGATACAGCCCATTGAGAAAAGGACACATGAAGTCGAAGCTTTCATAAAGTCTATCAAGCCAGATTTGGAAGTGCAAGCTGTACCAATCACAGATCCGTATGGCCCTTCCATTGTAGATGAAAATTTGGAGGCTGTGATTGTAAGCAAAGAGACATTACCGGGTGGATTGGCAGTAAACAGAAAAAGAGTTGAAAAAGGTCTTTCACAGTTGAAGATTGAAGTTGTAGATTTGGTCTCTGGAGAATCAGGTGGAACTAAGCTGAGTTCATCAATGTTGCGAAAACTTGAGGCTGAAAAGGCCCAAAAACCAAGCACGATATCACAGTCATAG 2001 0.4868 MEAHLRIFNPSILGRRLLPKATPYPSTSYQLVPRRRILPISSTLSRSSQPPFPPISDPRRFFSSLTSSQNLNFSIPNGNNLNPFHSHSQGGGETVWNPASENGGDVGFYGGKDRVATVVLLGWLGAQTKHLKRYVEWYNSRGFHAVTFIVDVKELLRFDLGDMLEQRISMFADNLISWVSSEEHDGRERCLIFHTFSNTGWFTYGSILARMLGSQDLMEKIKGCIVDSGGGEPFNPQVWAAGFSAAILKKRSSSAQAAVEVGNKLEKETEINLSKIQQNEPSPIETVVLSLLEKLFSFGLQLPDVKQRLTKVVNVLLDHQPCPQLYLYSTGDKVVPFQSIEAFIAEQRKRGKRVRSFNFGSSPHVDHYRTFPEIYLSQLTEFLNECEPTSSRNLQPKVSVQNHLTISPNLKPHHHSQTPDRREKREEEIESFPQNYSVWVCLFAEAEAQAVDHNIYPPHPTPPHPTPTQSLFCSHLSSNTYHHLPLHNIMAVNDDPMVVPTLSPPNTYEAVVNGGTFDRLHDGHRLFLTASAQLARRRIVIGVCDGPMLAKKQFAELIQPIEKRTHEVEAFIKSIKPDLEVQAVPITDPYGPSIVDENLEAVIVSKETLPGGLAVNRKRVEKGLSQLKIEVVDLVSGESGGTKLSSSMLRKLEAEKAQKPSTISQS* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0474 666 CDD PPAT_CoAS 511 651 - -
Lja2g0474 666 Pfam Cytidylyltransferase-like 514 584 IPR004821 GO:0003824|GO:0009058
Lja2g0474 666 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 46 391 - -
Lja2g0474 666 Pfam Eukaryotic protein of unknown function (DUF829) 117 383 IPR008547 -
Lja2g0474 666 Gene3D HUPs 510 659 IPR014729 -
Lja2g0474 666 Gene3D alpha/beta hydrolase 108 428 IPR029058 -
Lja2g0474 666 SUPERFAMILY alpha/beta-Hydrolases 83 386 IPR029058 -
Lja2g0474 666 PANTHER UNCHARACTERIZED 46 391 IPR008547 -
Lja2g0474 666 SUPERFAMILY Nucleotidylyl transferase 511 655 - -
Lja2g0474 666 MobiDBLite consensus disorder prediction 404 428 - -
Lja2g0474 666 MobiDBLite consensus disorder prediction 638 666 - -
Lja2g0474 666 MobiDBLite consensus disorder prediction 414 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0474 Lja-Chr2 4304436 4314488 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0474 - - lja:Lj0g3v0269109.1 691.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0474 2 4304436 4314488 Lja2g0474 2 4304436 4314488 ECH