Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0472 ATGGCGACGGTTTCTATGGCATTCTGTGTCAACACAGTCACATTTTCGAACCATGGCCGACACAACAGGTCTCGAGGAATGGCATTTGCTAGTTTGGGCAAAGAAGCTACCACTCTGGGAGTGAAACTTACAGAAGGCGAAGGGAGTTTGCCAAAACTCGTGCTCACTTCACCAGCTGGTAGTGAAGCTGAAATCTACCTCTTTGGAGGTTGTATCACCTCTTGGAAAGTTCCCAGTGGCAATGACCTCTTGTTCGTTCGCCCTGATGCTGTTTTCAATAAGAAGAAACCAATAAGTGGAGGTGTCCCACATTGTTTTCCTCAGTTTGGTCCTGGTCCAATTCAGCAGCATGGGTTTGCACGAAATATGGATTGGACTGTTGCTGATTCTGAAAGTGTGGAAGGAAATCCCGTTGTAACTCTGGAACTGAAGGATGCTCCTTATAGTCGTGATATCTGGGATTTCAGTTTCCATGCTTTATTCAAGGTCACTCTAAATGCTAAGAGTCTTTCGACTGAGTTAAAAGTTAAAAACACAGACAATAAGGCATTCTCGTTTAATACTGCCCTGCACACATATTTCCGTGCTTCTGTGAGTGGCACATCTGTTAAGGGGTTAAAAGGTTGCAAAACTCTGAACAAACATCCAGATCCTAATAATCCAGTGGAGGGTACGGAAGAAAGGGATGTGGTCACTTTCCCTGGATTTGTAGATTGCATTTATCTTGACGCTGCCAATGAGTTGCAACTTGACAATGGCTTGGGCGATCTGATATCAATTAAGAATACAAACTGGTCAGATGCTGTGTTGTGGAATCCACATCTTCAAATGGAAGCATGTTACAAAGATTTTGTTTGCGTTGAAAATGCTAAGATTGGAAGTGTCCAGCTAGAGCCAGAGCAAACTTGGACTGCTGTGCAGCATCTCAGCATTGCTTGA 939 0.4388 MATVSMAFCVNTVTFSNHGRHNRSRGMAFASLGKEATTLGVKLTEGEGSLPKLVLTSPAGSEAEIYLFGGCITSWKVPSGNDLLFVRPDAVFNKKKPISGGVPHCFPQFGPGPIQQHGFARNMDWTVADSESVEGNPVVTLELKDAPYSRDIWDFSFHALFKVTLNAKSLSTELKVKNTDNKAFSFNTALHTYFRASVSGTSVKGLKGCKTLNKHPDPNNPVEGTEERDVVTFPGFVDCIYLDAANELQLDNGLGDLISIKNTNWSDAVLWNPHLQMEACYKDFVCVENAKIGSVQLEPEQTWTAVQHLSIA* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0472 312 PANTHER GLUCOSE-6-PHOSPHATE 1-EPIMERASE 18 311 - -
Lja2g0472 312 PIRSF PHexose_mutarotase 38 312 IPR025532 -
Lja2g0472 312 SUPERFAMILY Galactose mutarotase-like 54 309 IPR011013 GO:0003824|GO:0005975|GO:0030246
Lja2g0472 312 Pfam Aldose 1-epimerase 52 309 IPR008183 GO:0005975|GO:0016853
Lja2g0472 312 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 18 311 - -
Lja2g0472 312 Gene3D - 49 311 IPR014718 GO:0030246
Lja2g0472 312 CDD D-hex-6-P-epi_like 52 310 IPR025532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0472 Lja-Chr2 4297798 4300908 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0472 K01792 - gmx:100797902 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0472 2 4297798 4300908 Lja2g0472 2 4297798 4300908 ECH