Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0460 ATGGTGAACCTGGTGACAGCATACTGCTCAATGCTGCGTTGGGGGATGATGAAGATAGCGGGTGTGAGGCCGTACACGGTGGAGATAGAGCCAGGGACAGTGATGAGATTCTGGGTTCCCTCAGAAACCCCTTTGAAGCCCAAACCAGTGGTGGTTCTCCTCCACGGCTTCTGCGGGGATGGCATTATGACGTGGCAGTTCCAGGTTGGCGCTTTAACTAAAAATTACGCCGTGTACGTGCCGGACTTCCTCTTCTTCGGCAGCTCAGGCACCGACAGGCCGGAGCGGTCCGTGGCGTTTCAGGCGGAGTGTTTGGCGGCGGGGTTGAGGAAGCTCGGGGTGGAGAAGTGCATTGTGGTTGGGTTTAGCTACGGCGGGATGGTGGCGTTCAATATGGCGGAGATGTATCCTGAGCTGGTCCAAGCAGTTGTGGTGTCTGGGTCGTGTGTGGCTATTATGGAGTCTATAATTACAACTGTAGTGGAAGAAGCTGGGTTTTCTTCTTGTTCCGACATGCTATTGCCAACCTCTGTTGAGGGATTAAGGGCACTTCTCTCAATTGGTGCTCACAAAAACTTGGCATGGTTTCCCAACCGTTTCTACAGAGACTTTCTTGAGGTTATGTACTCAAATAGGGAGGAACGAGGCGAGCTATTAGATGAATTAGTCACCAGCTATAAAGAAATCAACATCCCAAAATTTCAGCAGCAAATACATCTTTTGTGGGGCGCGAACGATAAACTTTTCAAAGTAGAGCTTGCAAAGAAGATGAAAGAGAAGCTTGGAAGCAAGGCCACATTTCAAGTCATAAAAGAGGCTGGCCATCTGGTTCACTTGGAGCGACCCTTTGTTTATAATAGGTGCCTTAAACAGTTTCTATCTTCGGTTATGCCTCTGCCTGAAGCCCTGAAAGACAATCCAACTTACATGTTACACTTTATTGATTATTTACGACACTATGAAGGAATTTATTAG 975 0.4821 MVNLVTAYCSMLRWGMMKIAGVRPYTVEIEPGTVMRFWVPSETPLKPKPVVVLLHGFCGDGIMTWQFQVGALTKNYAVYVPDFLFFGSSGTDRPERSVAFQAECLAAGLRKLGVEKCIVVGFSYGGMVAFNMAEMYPELVQAVVVSGSCVAIMESIITTVVEEAGFSSCSDMLLPTSVEGLRALLSIGAHKNLAWFPNRFYRDFLEVMYSNREERGELLDELVTSYKEINIPKFQQQIHLLWGANDKLFKVELAKKMKEKLGSKATFQVIKEAGHLVHLERPFVYNRCLKQFLSSVMPLPEALKDNPTYMLHFIDYLRHYEGIY* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0460 324 SUPERFAMILY alpha/beta-Hydrolases 29 295 IPR029058 -
Lja2g0460 324 PANTHER EPOXIDE HYDROLASE 4-LIKE 2 293 - -
Lja2g0460 324 Gene3D alpha/beta hydrolase 15 297 IPR029058 -
Lja2g0460 324 PRINTS Epoxide hydrolase signature 270 292 IPR000639 GO:0003824
Lja2g0460 324 PRINTS Epoxide hydrolase signature 75 90 IPR000639 GO:0003824
Lja2g0460 324 PRINTS Epoxide hydrolase signature 119 132 IPR000639 GO:0003824
Lja2g0460 324 PRINTS Epoxide hydrolase signature 133 146 IPR000639 GO:0003824
Lja2g0460 324 Pfam alpha/beta hydrolase fold 49 282 IPR000073 -
Lja2g0460 324 PRINTS Alpha/beta hydrolase fold signature 133 146 IPR000073 -
Lja2g0460 324 PRINTS Alpha/beta hydrolase fold signature 75 90 IPR000073 -
Lja2g0460 324 PRINTS Alpha/beta hydrolase fold signature 119 132 IPR000073 -
Lja2g0460 324 PRINTS Alpha/beta hydrolase fold signature 238 252 IPR000073 -
Lja2g0460 324 PANTHER SI:DKEY-122A22.2 2 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0460 Lja-Chr2 4203210 4204536 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0460 51 298 Miscellaneous Gene Families AT1G80280 25.357 1.58e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0460 - - mtr:MTR_5g020250 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0460 2 4203210 4204536 Lja2g0460 2 4203210 4204536 ECH