Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0432 ATGACATCCAAGTTTTTGCATTTTAAGATGTTGTCTGGTATTCTAGGGGTGCCAACAACACCCTTGTATAGGAGGAATAGTCCTGCTCTGTCTGTTTCTTCACTGCATTCAAACCTCAAGTTCAATAGAATATCAATGGCTACTTCAGCTTCCAATGCTGTGTTGGGAGATGTTTATGTTGATGACTTGGTCTCGAGTTGCGGCGGTGTGTTGAACCTCTCAAAGCCAGCTTATGCGTACTTCAAAGAGAGAGCACGCAATGGTTGCCTTAGAGCTAGAGTGAATCCAACAAGACAACAACTCTTTGGCTGTTCCAGTTTTGATGGTAATTCAAGTTTGCTTCATGGACCAAGGGTGAAGAATGTCTCGTCCTCTTTATCTGCTCTCTGCTTGGCTAGGGCGGTTCATGATGTCTCCATTGATGGAAGCCCTCCTGATGAACAGCTTGCAAATTCCTCTACTCTGCCTAACATAACTACTGTTAGTGGGAAGACCTTGAAGATGATTGCAGGATCATGTTACCTACCTCATCCAGATAAGGTGGAGACAGGGGGAGAGGATGCTCATTTTATTTGCACAGATGAACAAGTAATTGGTGTTGCTGATGGTGTAGGTGGTTGGGCAAACGTTGGTGTTAATGCTGGACTTTATGCCCAGGAACTTATGTCCAATTCAGTGAGAGCAGTTAAAGAGGAGCCAGACGGTTCTTTTGATCCAGTGAGGGTGTTAGAGAAGGCTCACTCGAATACAAAGGCCAGAGGTTCATCTACAGCTTGCATCATTGCCCTTACTGATAAGGGACTACATGCTATTAATTTAGGTGACAGTGGATTCATTGTGGTTAGAGACGGATGCACCATTTTCAGCTCCCCTGCTCAACAGCACGATTTCAATTGCCCATATCAGTTGGAGCGTGGTAATGAAGGTGATCTACCCAGCTCTGGTGAGGTTTTTACATTACCTGTTGCTCCAGGAGATGTCATCGTTGCTGGAACAGATGGTTTATTTGACAACTTGCACAATGATGAGATCACTGCAGTAGTTGAACATGCAGCTAAAATGGGACTAGAACCACACATGACTGCTCAGAAGATAGCAGCACTTGCTCGTGAGAGAGCACTGGACAAGTTTGGGCAGACACCATTTTCAACTGCTGCTCAGAAAGTTGGATTTCCTTATTATGGTGGAAAACTTGATGACTTAACAGTTGTTGTGTCATACATACCCAACTCAACTAGCGAGTAG 1245 0.445 MTSKFLHFKMLSGILGVPTTPLYRRNSPALSVSSLHSNLKFNRISMATSASNAVLGDVYVDDLVSSCGGVLNLSKPAYAYFKERARNGCLRARVNPTRQQLFGCSSFDGNSSLLHGPRVKNVSSSLSALCLARAVHDVSIDGSPPDEQLANSSTLPNITTVSGKTLKMIAGSCYLPHPDKVETGGEDAHFICTDEQVIGVADGVGGWANVGVNAGLYAQELMSNSVRAVKEEPDGSFDPVRVLEKAHSNTKARGSSTACIIALTDKGLHAINLGDSGFIVVRDGCTIFSSPAQQHDFNCPYQLERGNEGDLPSSGEVFTLPVAPGDVIVAGTDGLFDNLHNDEITAVVEHAAKMGLEPHMTAQKIAALARERALDKFGQTPFSTAAQKVGFPYYGGKLDDLTVVVSYIPNSTSE* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0432 414 SMART PP2C_4 159 406 IPR001932 -
Lja2g0432 414 PANTHER PROTEIN PHOSPHATASE 2C 33 413 IPR039123 -
Lja2g0432 414 Pfam Stage II sporulation protein E (SpoIIE) 197 406 IPR001932 -
Lja2g0432 414 SUPERFAMILY PP2C-like 172 406 IPR036457 -
Lja2g0432 414 PANTHER PROTEIN PHOSPHATASE 33 413 - -
Lja2g0432 414 SMART PP2C_SIG_2 176 408 IPR001932 -
Lja2g0432 414 Gene3D - 173 408 IPR036457 -
Lja2g0432 414 ProSiteProfiles PPM-type phosphatase domain profile. 172 408 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0432 Lja-Chr2 3947986 3951788 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0432 K17508 - gmx:100785804 501.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0432 2 3947986 3951788 Lja2g0432 2 3947986 3951788 ECH