Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0424 ATGGAAAACACACTTTCAGCGTTGAGGTCGTTGATGGCGTCTCACTCTCCGCCTCTTGATGCCTTAGTTGTCCCCTCTGAAGATTATCACCAGAGTGAATACGTCTCCGCTCGAGACAAGCGTCGTGAATTCGTCTCTGGCTTCTCTGGAAGTGCTGGTTTGGCACTTATAACTAAGGATGTAGCACTGCTGTGGACCGATGGACGCTACTTTTTGCAGGCTGAACAACAACTTAGTGATGAGTGGAAGCTAATGCGCATTGGTGAAGATCCTGCTGTGGACACCTGGATGGCTGATAACTTGCTAAAAGAAGCATCCATCGGGGTTGATCCTTGGTGCATTTCAATTGATACTGCCCAAAGATGGGAGCGTTCTTTTGCCGAAAAACAGCAGAAGCTGGTTCAGACAACAAAAAACTTGGTTGATGAAGTATGGGCAGATCGCCCACCGGCCGAGATTAATGCTGTGGTTGTACAACCATTAAAATTTGCAGGTCGCTCTGTTGCAGATAAATTGAAAGATTTGAGAAAAAAGCTTGTACAGGAGCAAGCTCGGGGGATAATTTTCACATCACTTGATGAAGTTGCATGGTTGTATAATATTCGTGGAAATGATGTGGCATACTGTCCCGTTGTTCATGCATTTGCTATTGTGACATCCAATTCTGCTTTCCTTTATGTGGACAAGCGTAAGGTGTCAGCTGAGGTAAAGTCTCATTTGGAGGAGAATGGAATTGAAATTCGAGAGTACACAGCAGTAAGCTTTGATGTTGCATTGCTTGCAACGGATGAGCTTGATACTACATCTACTGCCAAAGATACTCTAGCTGAAATTACAAAGCAGGCTGAAAAATTTGTCAGTGAAACCAATAAGAGTGTAAACGGCAAACATCAGGCAAAAGAAAATAGTAACAACCTCATATGGGCTGATCCAGGTTCATGCTGTTATGCAGTGTATTCAAAATTGAACCCTGATACAGTTCTCTTGCAGCAATCACCTTTGGCTCTTGCAAAAGCTTTGAAGAACCCGGTGGAGTTGGAGGGGTTAAAACAGGCACATATTCGGGATGGTGCAGCTGTTGTGCAATATCTTGTCTGGTTGGATAAGCAGATGCAGGATATTTTTGGAGCATCTGGTTACTTCTCAGAGGGGAATACTGTGAAAAAAGAGGAACTGTCGCAGTCCTTGAAATTAACTGAGGTGACTGTAAGTGACAAGCTTGAAGGTTTTCGAGCATCAAAAAAGCATTTCAGAGGATTGAGTTTCCCTACTATTTCCTCTGTTGGTCCCAATGGCGCTGTTATTCATTATTCTCCAAAAGCTGAAACATGTGCCGAGCTTGATCCAGATAAAATTTATCTTTTTGATTCTGGTGCCCAGTATCTAGATGGAACAACTGATATTACAAGAACAGTTCATTTTGGGAAACCTTCGGCCCATGAGAAAGCATGCTATACAGCGGTCTTAAAGGGTCACATTGCTCTTGGGAATGCTGTGTTTCCTAATGGGACAAATGGTCATGCCCTTGATATACTTGCTAGAATTCCTTTGTGGAAGAATGGTCTTGATTATCGACATGGTACTGGTCATGGTATTGGGTCCTACCTGAATGTTCATGAAGGACCTCATTTAATCAGTTTCAAACCTCGGAATGTACCGTTGCAATCTTCCATGACTGTTACAGATGAGCCTGGTTACTATGAAGATGGAGCATTTGGAATAAGATTGGAGAATGTGCTTATAATCAACGAGGCTGATACAAAATTCAATTTTGGTGATAAGGGTTACTTATCTTTTGAGCATATTACCTGGGCACCATATCAAACGAAGTTGATTGACCTGAACCTTCTAACGCCTGATGAGATAAATTGGCTGAACTCTTATCACTCCAGATGTAGGGATATTTTGCAACCACATTTGGATGATGCAGCTGAAAATGAATGGCTCAAGAAAGCCACTGAACCTGTAGGTGTGTGA 1977 0.4264 MENTLSALRSLMASHSPPLDALVVPSEDYHQSEYVSARDKRREFVSGFSGSAGLALITKDVALLWTDGRYFLQAEQQLSDEWKLMRIGEDPAVDTWMADNLLKEASIGVDPWCISIDTAQRWERSFAEKQQKLVQTTKNLVDEVWADRPPAEINAVVVQPLKFAGRSVADKLKDLRKKLVQEQARGIIFTSLDEVAWLYNIRGNDVAYCPVVHAFAIVTSNSAFLYVDKRKVSAEVKSHLEENGIEIREYTAVSFDVALLATDELDTTSTAKDTLAEITKQAEKFVSETNKSVNGKHQAKENSNNLIWADPGSCCYAVYSKLNPDTVLLQQSPLALAKALKNPVELEGLKQAHIRDGAAVVQYLVWLDKQMQDIFGASGYFSEGNTVKKEELSQSLKLTEVTVSDKLEGFRASKKHFRGLSFPTISSVGPNGAVIHYSPKAETCAELDPDKIYLFDSGAQYLDGTTDITRTVHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTNGHALDILARIPLWKNGLDYRHGTGHGIGSYLNVHEGPHLISFKPRNVPLQSSMTVTDEPGYYEDGAFGIRLENVLIINEADTKFNFGDKGYLSFEHITWAPYQTKLIDLNLLTPDEINWLNSYHSRCRDILQPHLDDAAENEWLKKATEPVGV* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0424 658 Gene3D Creatinase/methionine aminopeptidase superfamily 339 657 IPR036005 -
Lja2g0424 658 Gene3D - 146 337 IPR029149 -
Lja2g0424 658 Pfam Creatinase/Prolidase N-terminal domain 5 141 IPR000587 GO:0016787
Lja2g0424 658 SUPERFAMILY Creatinase/prolidase N-terminal domain 41 131 IPR029149 -
Lja2g0424 658 Pfam Creatinase/Prolidase N-terminal domain 147 345 - -
Lja2g0424 658 CDD APP 348 592 IPR033740 GO:0070006
Lja2g0424 658 PANTHER AMINOPEPTIDASE P1 3 656 - -
Lja2g0424 658 SUPERFAMILY Creatinase/aminopeptidase 342 621 IPR036005 -
Lja2g0424 658 Pfam Metallopeptidase family M24 350 583 IPR000994 -
Lja2g0424 658 Gene3D - 1 145 IPR029149 -
Lja2g0424 658 Pfam C-terminal region of peptidase_M24 596 655 IPR032416 -
Lja2g0424 658 ProSitePatterns Aminopeptidase P and proline dipeptidase signature. 526 538 IPR001131 -
Lja2g0424 658 PANTHER XAA-PRO AMINOPEPTIDASE 1 3 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0424 Lja-Chr2 3871949 3880233 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0424 K01262 - gmx:100803268 1142.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0424 2 3871949 3880233 Lja2g0424 2 3871949 3880233 ECH