Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0396 ATGGTTAATCACATCACAGTGATGGCAGAAATTAGGCCTACCCGGGTGGAGCAAGATCAAACCAAGATCAGAAGTGTTCCAATTGCTGTAACCCCTGAAGGATTTTGGTGTTGCCCTTCCCCTGCAGTGTTTCAGAAAACCCTGAAGACTCAAAGTCCTCTGAATAAGCCTAAACCCTCTTCACCAAATCCAAACACTAGTGCTCAGAAAAGAGAAGTTTCAGTGAGTGATGAGAGAAGAACAGTACCTGCCCCATCAAGGATGGTGGATTCAGATGCTCAACAATGTTCTGTGGCTGCAGAGAGAGCTGTTCCCAAACCCAAAACTGAAAAAACTCTGCCCAAAAAGGTGGCTATTGAGTTTGGTGAACCTGGAACTTGTGATATGAAGGTGGTTCTAACCGGAAAGCAGGGGTTTTGTGTGAAGTTGAGCTTGCACAGGGATGTTCTAACAGAGAAGAGTAGTTTCTTTGCTGAGAAATTCTATGAGGATTGTGGTTTGTCATTTCTCCGAGTTGATGATTGTGAGGATGTTGAAATGTTTGTTGAAACGGTTGGGCTTATGTACTGCAGAGAAATGAAACAGCGGCTCATGAAGCAAACGGTTTCTCGCATCCTCCGAATACTCAAGGTTGCAGAATTCCTTGGCTTCAGCTTATGCATCCAATCATGTTTGGAGTACTTGGAGGCAGTCCCCTGGGTTGGAGAAGAAGAAGAAAAGGTGGTGTCAACTGTACTAAGACTCCAACGAGAAGGAACCGGGGTCAATCCCGTGCTGAAACGTGTTTCTTTTGATGCTTCTAATGGCCCAAAAGACACTCTATCCCATATTCTTGAGCTTGTTCTCAAAAGCAATGAGGAGAGAGGTCGCCGAGAGATGAAATCCATAGTTCTAAAGCTCCTCAGAGAGAATAACAGATTTCCATGCCCTGCGGGTTCAGATGACATCTGTAACAATGACATGATTTATAGGTCATGCAGAAGCTGCTTGGATTCTCTATTATCTCTGTTCAACCAGGCTGCAGAACTAGGCTTTGCAGACACACCTAGTGATAACAGAGAACCTGTAGTGAAACATATAGCTCTTGAAGCTGATAACTTGTTATGGTTGCTTGAGATTTTATCCGACAAACAAGCCGCGGATGAGTTTGCCCTGATGTGGGCAAACCAGCAGGAATTGGCTGCTCTACATGGAAAGCTGCCTATCGTATTTCGTTATCACGTCAGCTGCATTTCAGGAAGACTATATGTCGGAATTGGAAGAGGGGAGTTATTACCGTTGAAAAACACGCGCCGGCTGCTGTTACAGACATGGCTGCAACCTCTGATCAACGACTACAACTGGTTGCAGCATGGATGCCGGTCATTTGATTGGAAACTTGTGGAGGAAGGAATCGGAAGGACGATTCTCACCTTGCCTTTGGAAGAACAACAAAATATTTTGCTTTCTTGGGTTGGAAGTTTCTTGAAAAGTGGTGATGGATGTCCCAATCTTCAAAGAGCTTTTGAGGTTTGGTGGCGGAGAACTTTCATTAAACCATATGTGGAAGGACAAGGTAATGCTATGCCAAATAGTTAA 1578 0.4449 MVNHITVMAEIRPTRVEQDQTKIRSVPIAVTPEGFWCCPSPAVFQKTLKTQSPLNKPKPSSPNPNTSAQKREVSVSDERRTVPAPSRMVDSDAQQCSVAAERAVPKPKTEKTLPKKVAIEFGEPGTCDMKVVLTGKQGFCVKLSLHRDVLTEKSSFFAEKFYEDCGLSFLRVDDCEDVEMFVETVGLMYCREMKQRLMKQTVSRILRILKVAEFLGFSLCIQSCLEYLEAVPWVGEEEEKVVSTVLRLQREGTGVNPVLKRVSFDASNGPKDTLSHILELVLKSNEERGRREMKSIVLKLLRENNRFPCPAGSDDICNNDMIYRSCRSCLDSLLSLFNQAAELGFADTPSDNREPVVKHIALEADNLLWLLEILSDKQAADEFALMWANQQELAALHGKLPIVFRYHVSCISGRLYVGIGRGELLPLKNTRRLLLQTWLQPLINDYNWLQHGCRSFDWKLVEEGIGRTILTLPLEEQQNILLSWVGSFLKSGDGCPNLQRAFEVWWRRTFIKPYVEGQGNAMPNS* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0396 525 ProSiteProfiles BTB domain profile. 127 197 IPR000210 GO:0005515
Lja2g0396 525 MobiDBLite consensus disorder prediction 51 71 - -
Lja2g0396 525 PANTHER BTB/POZ DOMAIN PROTEIN 8 521 - -
Lja2g0396 525 SUPERFAMILY POZ domain 123 228 IPR011333 -
Lja2g0396 525 Gene3D Potassium Channel Kv1.1; Chain A 100 231 IPR011333 -
Lja2g0396 525 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 8 521 IPR038920 -
Lja2g0396 525 MobiDBLite consensus disorder prediction 51 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0396 Lja-Chr2 3621515 3625325 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0396 - - gmx:100818853 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0396 2 3621515 3625325 Lja2g0396 2 3621515 3625325 ECH
Lja2g0396 2 3621515 3625325 Lja4g3258 4 61371692 61375901 PCT