Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0391 ATGGGAAACTGCAAATCCTCCGATTCAACTCAGGTCGCCACGGCCAAACTCGTCCTGCACGACGGAAGGTTACAGGAGTTTTCATACCCAGTCAAGGTTTCCTACTTGATGCAGGCGTACCCAGCATGCTTCATATGCAACTCCGACGAGCTTGGCTTCGACGACGTTGTCACCGCCGTTGATGAGAACCAGGTGTTGCAGCCTGGCCAGCTTTATTTCGCTCTTCCGTTGAGCTGGTTGCGGCATCCTTTGCAGGCTCACGAGATGGCTGCATTGGCCGTTAAGGCCAGCTCCGCGCTCATGAAAAGCGCCGCCTCTGATAAATACGGTTACCGCCGGAAGCAGGTTATGTTCTCCGGTGAATGTGACGTTAAGCGTGAGTCTCCGGTGGATGGTTCAGGCGGCGGTACTGTGCATAGGTCGAGAAGAGTAAGGACCCGTGGCGGTAGTGCTGGTGGTGGGCAGTTTTCGGCGTTGATGTTGAGTTCGATACCGGAGTAG 501 0.5509 MGNCKSSDSTQVATAKLVLHDGRLQEFSYPVKVSYLMQAYPACFICNSDELGFDDVVTAVDENQVLQPGQLYFALPLSWLRHPLQAHEMAALAVKASSALMKSAASDKYGYRRKQVMFSGECDVKRESPVDGSGGGTVHRSRRVRTRGGSAGGGQFSALMLSSIPE* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0391 166 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 165 - -
Lja2g0391 166 PANTHER HTH-TYPE TRANSCRIPTIONAL REGULATOR 1 165 - -
Lja2g0391 166 MobiDBLite consensus disorder prediction 127 156 - -
Lja2g0391 166 Pfam PADRE domain 1 166 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0391 Lja-Chr2 3559378 3559973 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0391 - - gmx:100787837 209.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0391 2 3559378 3559973 Lja2g0391 2 3559378 3559973 ECH
Lja2g0391 2 3559378 3559973 Lja4g3269 4 61472609 61473447 PCT