Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0378 ATGGCCGCTACCAGAAAGCGAAACCGAACAACCACCGATCCACCTCTCCCTCCGAGTTCCAACCATGATCACCACACCATTTCTCAGTACGAACTCTGCAGAGAACAAAGAATCCGCGAGAATCGTGAGAGAATGGGAAAACTCGGCATTTTCGACCTTTCCCTCAAGCTCAAAACCCACAACCCTCCATCTTCACGCCGCACAACTCCATCCTCCGCCAACAAAACCCCGCCGTCACTCCACCCCTCCGGTCCCACTCGCCGCTCTTCCAGATTGCAGAACGTGGCTCCTGTTAGTTACTCTGAAGCGCCACCCAAGAAGTCTGAGATTGTGGAAAGTAGAAGGATTGTGATTGAAGAAGGTTCCAAGCCTGAGGTTTACACTGAAGAGCATGAGAAGCTGTTGGGGAACACGGAGAGGACCTGGACGCTGTTTGTTGATGGTTATGGCAAAGATGGGAAACGAATTTATGACTCCTTTCAAGGGAAAACTTGCCATCAGTGCAGGCAAAAAACTCTTGGTTATCGTACATGCTGTTGCAAATGCAACATGGTACAAGGTCAGTTTTGTGGAGATTGCTTGTACATGAGATATGGAGAGCATGTACTTGAAGCTTTGGAGAATCCAGATTGGATATGCCCGCCTTGTCGTGGAATCTGCAATTGTAGCTTATGCCGTCAGGCAAAAGGATGGGCTCCTACTGGCATGCTATATAAAAAGATATCAAACTTGGGTTACAAGTCAGTTGCGCACTACCTCGTTCAAACCCGGCGCGCAGAAATTATAGAAGTTGACAAAGATGCAGATGCTTCCAACCCAGTATCAGCAAAGAGGTCTCTACCTTTCTCTGATGTGACCAAGTCTCATGAGGTCAACGATCTTGACTTACCACTGAAAAAAAAAAAAAAACCACTGAAGGCTCAAGCTGAAACTTCAAATAATGGTGATGAAGTTTTGGCAAAGAGATCGTTGCTTTTCTCTGATGAAAAAGGGCAGCTTGCAAAAGTTGAGGGTTCAGATACAGTGAAGCCACTTCAGCTTGAAAACGTTGAGTGTTCTGATACCATGAAGCCCCTTGCTTCTTCCACCAAACCTTGCACAGACGGCATTGCTGGAAGGCTTAGGTCTAGGACCAAAAAACTGTGA 1146 0.4686 MAATRKRNRTTTDPPLPPSSNHDHHTISQYELCREQRIRENRERMGKLGIFDLSLKLKTHNPPSSRRTTPSSANKTPPSLHPSGPTRRSSRLQNVAPVSYSEAPPKKSEIVESRRIVIEEGSKPEVYTEEHEKLLGNTERTWTLFVDGYGKDGKRIYDSFQGKTCHQCRQKTLGYRTCCCKCNMVQGQFCGDCLYMRYGEHVLEALENPDWICPPCRGICNCSLCRQAKGWAPTGMLYKKISNLGYKSVAHYLVQTRRAEIIEVDKDADASNPVSAKRSLPFSDVTKSHEVNDLDLPLKKKKKPLKAQAETSNNGDEVLAKRSLLFSDEKGQLAKVEGSDTVKPLQLENVECSDTMKPLASSTKPCTDGIAGRLRSRTKKL* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0378 381 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 157 253 IPR018866 -
Lja2g0378 381 MobiDBLite consensus disorder prediction 356 381 - -
Lja2g0378 381 PANTHER OS05G0300700 PROTEIN 17 379 IPR040221 GO:0006355
Lja2g0378 381 MobiDBLite consensus disorder prediction 1 26 - -
Lja2g0378 381 MobiDBLite consensus disorder prediction 58 97 - -
Lja2g0378 381 MobiDBLite consensus disorder prediction 54 106 - -
Lja2g0378 381 MobiDBLite consensus disorder prediction 1 29 - -
Lja2g0378 381 PANTHER ZINC-FINGER DOMAIN OF MONOAMINE-OXIDASE A REPRESSOR R1 17 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0378 Lja-Chr2 3464118 3467380 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0378 K23408 - gmx:100791534 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0378 2 3464118 3467380 Lja2g0378 2 3464118 3467380 ECH