Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0204 ATGGAAGAGAAGAAGGTTAGCACCCAAGACCTCCATCACCATGATTCCACTCAGCCGCCGAAACCACCACAGGCGGAAATAGGGGGTGGTGGGACTGGTGACTTTACTGTTAAAGGCTTCGCAGAGAAGAGAGCCAGTCGGTGTTCTTCTAATGAACACATTCTGTTCTCTCCTTTGTTGAGTGGCGCAAATGTTGCAACACATTCTGTTCCAGAATCAGAAATCCATGGGGATAATATCTCATGTGTGAGAAGATCAGGCGGCACAAATGTCGCAACAGGTGAGAATGGTGATCGTGATAGGAAGGATGAATCTCACTGTTTGACTTCAGATGATAGCGTTCCCGTGGATGAAAAGGTGGTGACCTGTACTTGTTTTGACAAAGCTGGTTGCAATCACTGTGATGTTCCAAACTTTACTGAAGAACTTCCACTGGTTGAGGGAGAACCTTTTGAGTGCTCAAGTCATTCATCTCAGAAGAATGATCTCCGGCAGTCTGTTGCTCTCATCAACAACACAAGAATGCAAGAATCTCAGCAATCACAACCAGGAAACCATAGCAATGTTTCAGATTTAATGGACGATTGGGTTAAAGTTTGTGATACCTGTGGGGCTGTAGGAGATGAGTCCTTACTTGTTTCTTGTAACAAGTGTACTGATGGCGCAGAACACACTTATTGTATGCGTGTTAAGCTGTTTGAAAAGCCTAAAAGTTGGACGTGTCAAGATTGTGCACCAAGGGCAGGAACTAACAAATTAGTGGAAGATGACGTTGAAGTAGGTGCTAGAAGTAAGACAGGACATCTAACAAAACGTTCAATAAATCTTGAATCTAGTAAAGGTGCAAAATTCAGCTCTGGATCTTCATATCCCAGGAAAAGTAGTACCATTGGTGTAAGCTCTACAACTCATTTATCAGGTGATAAAATACATATAAGCACCGTTGCTCAGTCAGATGAAAAAAGAAGGGCTAGGAAACTTCCATCCAATAAGTTGGGGAAGGCGAAATTAGGGGCTGCAGGCTCTCTTTCTGCAGGCTCTCTGTTGAAGTCAAATTCTTCAAAAGCTGCGAATTTGAAACCTAAAGGACAGAATGCCAAGGCCGGATGTTTGCAAAAGCAGAAGGTAGAGAGAAATCCAGCTTTTCATGATGATAGAAAGGGAAAAGGCCCTATAGCGGTATCTAAATCTATGACATCTGAGAGTGCTTTCTTAGAAGAATCAAATGCTACTGGTTCGAAGGTTGTCCTAGCAGATGCTTATGAGCTAAGTAATTCTCCAATGCCCTTACTAGCTTCTGACTCTACTGTAACTACAGAAAAGAGTGAAAAAGAAACAAATTCTGGGGCTGAGACATTAGCGGATGGTTTGGAACTTAATAATCCTCCGATGCCCTTACTAGCTTCTGATTCTGCTATAACTACAGCAAAGAATGAAGAAGAAACCGTTTCTGGTGGTGAGACTTTAGCGGATGCTTATGAGCTAAATAATCCTCTAATGTCCTCATTTGCTTCTGATTCTGCTGTAACTGCAGAAAATAATGAAAAGGAAATTATTTCTGCTGGTGAGACTTTAGCGGATGCCTATGAGCTGAATAACTCTCCGGTGTCCTTTCTAGCTTCTTATTCTGCTGTAACTGCAGAAAAGAATGAAAAGGAAACTAGTCCTGGTGGTGAGACTTTATTTTCAGGATCTCATTTTTGTAATCTTGATGTTGTTGGAAGTTCACGACAACTGGATCATAGATCACATGCAAGCATTCATAACACTCATAAAGACTCAAACTGTACCAATATAAAGAAGAAAAATGTGAGCCAGCAAGCTGAACACCCTGCAACAGGCCTTGTCTTCCCAAATGTTCATCCTTCATGGCTAGGCAAATTTATGATACACAAAAGTGAGGGCATTGCAAGGAATTGTGATGGGTTTCAAGCTCATTTATCAAGTTGTGCATCACGTGAAGTTCCTGACAAGCTTCCTGAGATTATTATACTGGAGGAACTACCTCGCTTAAGGATCTGGCCATCTCAATTTATCAGAAGTCAAGTCACTGAAGAAAATATTTCCCTCTACTTTTTTCCAAAAGATGTTGATAGCGATGGAACAGACTATAGAGGATTGATAAATTGCATGATCAATAATGATTTAGCTCTGAAAGGAAATTTGGATGGGGCTGAGCTTTTAATTTTTCCATCCAACATTCTGCCTAAGAGATCCCAGCTTTGGAACCAGAATATGTTCCTCTGGGGAGTATTCAATGCACAAGTGGTGAATAACTCAGCAAACACACCAGTCTCAAATTCTGTTAAGCAAGGAAATGGAGATACTGTGAAAAGGAGGGAATTTGATCTCAATGCTTATCCTGAAGATGAAGATGACGACGCAGGTGTTAATCTTACTGTGCAGCAAGGAAATGGAGATACTGTGAAAAAGGGGACAATTGATCTCAGTGCATGTACTGAAGATGAAAATGTTGACGCAGGTGTTAATCTTGCAGTTGAGGGTAGAAGCACAACACCAGAAAATGGTTCTGTTAGGACTGAGCACCATGTTAAGGAGCTACCAACATCACTCTAG 2577 0.4148 MEEKKVSTQDLHHHDSTQPPKPPQAEIGGGGTGDFTVKGFAEKRASRCSSNEHILFSPLLSGANVATHSVPESEIHGDNISCVRRSGGTNVATGENGDRDRKDESHCLTSDDSVPVDEKVVTCTCFDKAGCNHCDVPNFTEELPLVEGEPFECSSHSSQKNDLRQSVALINNTRMQESQQSQPGNHSNVSDLMDDWVKVCDTCGAVGDESLLVSCNKCTDGAEHTYCMRVKLFEKPKSWTCQDCAPRAGTNKLVEDDVEVGARSKTGHLTKRSINLESSKGAKFSSGSSYPRKSSTIGVSSTTHLSGDKIHISTVAQSDEKRRARKLPSNKLGKAKLGAAGSLSAGSLLKSNSSKAANLKPKGQNAKAGCLQKQKVERNPAFHDDRKGKGPIAVSKSMTSESAFLEESNATGSKVVLADAYELSNSPMPLLASDSTVTTEKSEKETNSGAETLADGLELNNPPMPLLASDSAITTAKNEEETVSGGETLADAYELNNPLMSSFASDSAVTAENNEKEIISAGETLADAYELNNSPVSFLASYSAVTAEKNEKETSPGGETLFSGSHFCNLDVVGSSRQLDHRSHASIHNTHKDSNCTNIKKKNVSQQAEHPATGLVFPNVHPSWLGKFMIHKSEGIARNCDGFQAHLSSCASREVPDKLPEIIILEELPRLRIWPSQFIRSQVTEENISLYFFPKDVDSDGTDYRGLINCMINNDLALKGNLDGAELLIFPSNILPKRSQLWNQNMFLWGVFNAQVVNNSANTPVSNSVKQGNGDTVKRREFDLNAYPEDEDDDAGVNLTVQQGNGDTVKKGTIDLSACTEDENVDAGVNLAVEGRSTTPENGSVRTEHHVKELPTSL* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0204 858 MobiDBLite consensus disorder prediction 1 35 - -
Lja2g0204 858 MobiDBLite consensus disorder prediction 77 111 - -
Lja2g0204 858 MobiDBLite consensus disorder prediction 280 303 - -
Lja2g0204 858 MobiDBLite consensus disorder prediction 835 858 - -
Lja2g0204 858 MobiDBLite consensus disorder prediction 354 393 - -
Lja2g0204 858 MobiDBLite consensus disorder prediction 95 111 - -
Lja2g0204 858 MobiDBLite consensus disorder prediction 1 19 - -
Lja2g0204 858 MobiDBLite consensus disorder prediction 377 391 - -
Lja2g0204 858 SUPERFAMILY FYVE/PHD zinc finger 188 247 IPR011011 -
Lja2g0204 858 MobiDBLite consensus disorder prediction 431 461 - -
Lja2g0204 858 SMART PHD_3 199 245 IPR001965 -
Lja2g0204 858 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 160 249 IPR013083 -
Lja2g0204 858 PANTHER - 275 785 - -
Lja2g0204 858 MobiDBLite consensus disorder prediction 843 858 - -
Lja2g0204 858 PANTHER - 275 785 - -
Lja2g0204 858 PANTHER - 154 309 - -
Lja2g0204 858 PANTHER - 154 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0204 Lja-Chr2 1791609 1799006 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0204 - - lja:Lj2g3v1984660.1 1192.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0204 2 1791609 1799006 Lja2g0204 2 1791609 1799006 ECH