Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0201 ATGGCGGCAGCGACGACGTTGTTAGAAACCTTAGGCGATCTGGACAGAGATTCCTTCGTGCCCCTTCTCTCGAAGCTGATCGGCGAATCCAAACACCTCCAGAACAACCCGCCGGAGCTTATCCCGGAAGAGGACAGGGCGGTGAAGCATGTCATGGACGTCCTCCTCCCCTTCAGCACCACCACCGGCGGCGGCCCCTTGATCCTCAACCACGTCACCTACTTCCCCGGCAGAGGCAACCTCATCGTCGAGTACCCTGGTACCCACCCTAGCAAGGTCCTCTCCTTCGTCGGTTGCCACATGGATGTCGTCACCGCCAATCCCAACGACTGGGATTTTGATCCGTTTACGTTGAGTGTTGATGGGGATAAACTCAGGGGTCGTGGAACTACTGATTGTTTGGGACATGTGGCTCTTGTCACTGAACTCATGAGGAAGCTTGGGGAAACAAAGCCGAATTTGAAATCAACTGTTGTTGCTGTTTTTATTGCCAATGAAGAGAATTCTGCTATAACTGGTGTTGGTGTGGATGCACTTGTCAAAGATGGTCTCCTCAACAAGCTCAAGAATGGCCCTCTGTTTTGGATCGACACGGCAGATAAACAACCTTGTGTAGGCACTGGTGGTATGATACCTTGGAAACTTCATGTCACGGGGAAGCTCTTTCACAGTGGATTAGCTCATAAGGCTATAAATCCACTGGAACTAGCCATGGATGCTATGAAGGAAATCCAGTTGCGATTTTATAGAGACTTCCCACCTCATCCTCAGGAACAGGTTTATGGGTTTGCAACCCCTTCAACCATGAAACCAACCCAATGGAGTTATCCTGGAGGTGGAATCAACCAAATTCCAGGGGAATGCACTATTTCAGGAGATGTCAGGTTGACTCCATTCTACAATGTCAAGGATGTTATGAAGAAGTTGCAAGAGTATGTGGGTGATATTAATGAAAATATAAGTAAGCTAGAAGCACGAGGTCCAGTTTCAAAATATGTCCTATCTGATGAAAACTTAAGGGGAAGCCTTACTATAACTTTCGACGAGGCAATGTCTGGAGTTGCTTGTGATCTTAACTCTAGAGGTTTCCATGTTTTATGCAAAGCAACTGAGGAAGTAGTTGGGCATGTAAAGCCTTACTCAATGACTGGTAGTTTACCTCTCATTCGAGAACTTCAGGATGAAGGATTTGATGTTCAAACTTCTGGCTACGGTCTAATGGCAACTTACCATGCCCAGAATGAGTACTGTCTTTTTAACGACATGTCCCAAGGATATCGGGTGTTCACGAGTGTCATCTCTCAATTGGAAGACTAG 1317 0.4708 MAAATTLLETLGDLDRDSFVPLLSKLIGESKHLQNNPPELIPEEDRAVKHVMDVLLPFSTTTGGGPLILNHVTYFPGRGNLIVEYPGTHPSKVLSFVGCHMDVVTANPNDWDFDPFTLSVDGDKLRGRGTTDCLGHVALVTELMRKLGETKPNLKSTVVAVFIANEENSAITGVGVDALVKDGLLNKLKNGPLFWIDTADKQPCVGTGGMIPWKLHVTGKLFHSGLAHKAINPLELAMDAMKEIQLRFYRDFPPHPQEQVYGFATPSTMKPTQWSYPGGGINQIPGECTISGDVRLTPFYNVKDVMKKLQEYVGDINENISKLEARGPVSKYVLSDENLRGSLTITFDEAMSGVACDLNSRGFHVLCKATEEVVGHVKPYSMTGSLPLIRELQDEGFDVQTSGYGLMATYHAQNEYCLFNDMSQGYRVFTSVISQLED* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0201 438 CDD M20_ArgE-related 14 436 - -
Lja2g0201 438 Pfam Peptidase family M20/M25/M40 97 434 IPR002933 GO:0016787
Lja2g0201 438 PANTHER ACETYLORNITHINE DEACETYLASE 10 438 - -
Lja2g0201 438 Gene3D - 209 325 - -
Lja2g0201 438 Gene3D Zn peptidases 12 193 - -
Lja2g0201 438 SUPERFAMILY Bacterial exopeptidase dimerisation domain 209 319 IPR036264 -
Lja2g0201 438 PANTHER - 10 438 - -
Lja2g0201 438 Coils Coil 306 326 - -
Lja2g0201 438 SUPERFAMILY Zn-dependent exopeptidases 13 436 - -
Lja2g0201 438 Pfam Peptidase dimerisation domain 206 318 IPR011650 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0201 K01438 - gmx:100814676 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0201 2 1743446 1747578 Lja2g0201 2 1743446 1747578 ECH