Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0189 ATGACAATGACTGGTGCATCCTTGACTCTGGTTGCTTACAGTCCCACATTCCCTTCTTCTTCTTCTTCATCTTCTTCCTTCAAATCTCACAAACCTAAAACCAGTTGCAGAGTCTCACTCTCACCTTCACCACAACCCTTGTTCTCTTCCTCTGACCCCTTCGTTCTCGAACTCGCCGAAACCTTGGAAGACTCTCTCCCTTCCTCCACTCCACTCCTCCACAAGCTCCGAGACGCTTCCTCCCAATCCCTCATCTCCACTCCATGGCCATCCCGCAAGGACGAGCCCTTCCGCTTCACCGACCTCTCCCTCATCCGCTCCTCCAAAATCCTCCCCGTCGCACACCCCACAAAACCCCTCTCCGCCCTCCCCACCCACGCCGACGACGACTTCCCCTGCCGCCTCGCAATCGTCGACGGCCACTTCCTGCAATCGCTCTCCAATGTTCCCGAGCTTCCACAAGGGGTTTACGTTGGTAGCCTCTCCGGTCTCGCCTCTAGCTCCGTCATGGATAGGGTTTCGGAATTGGTTTGCGGATTGGACGGTGGTGATTTGTTCTGGTCAATCAATGGGATCGGCGCTCCTGATCTCACCGTGGTTTATGTCCCTGAAGGGTGCCGTGTTGAGAGCCCCATCCATTTGGTGTACTATGCAGTGGAGGGTAGTGGGGAGGGTTCGAAAACGTTGCCGGTTTCGAATCCGAGGGTGTTGGTGGTGGTGGAGAAGGGTGGAGAAGTAGGTATAATTGAGGAGTTTTGCAGTACAGAAGGGAATGGGAATGAGTGTTACTGGACAAATTCTGCATTGGAGGCAGTGATTCGAGAAGGCGCCAAGGTTACGCATTCTTATATTCAGACTCAGTCATCCAGTGCAGCTCATATCAAATGGACCTCCATTCGCCAGGAATCATCTAGTAAATACGAGCTTACAGAGGTAAGCACAGGAGGGAAACTGAGCAGGCACAATCTTCATATCAAACAACTAGGCCCAGACACTGTGACGGAGTTAACAACTTTACACTTGTCTGTTGGCGATCAAACACAGGATCTTCACAGTAGTCTTGTATTAGACCATCCAAGGGGCTATTCCCGTCAGCTTCATAAGTGCATAGTGGCTCATTCACAGGGACAGGCAGTTTTTGATGGAAACGTAAAGGTCAACAGGTATGCACAGCAGACAGATGCAGGACAGTTAACAAGAAGCCTTCTCCTTGAACCTCGCGCAACTGTAAATGTGAAACCAAATCTCCAAATTGTGGCTGATGATGTCAAATGCTCCCATGGAGCTGCAATAAGTGACCTGGAAGAGTCTCAACTCTTTTATTTTGTCGCACGCGGCATTGATCCAGCAACAGCTAGAAAGCTTCTTATTGATGCCTTTGGAGGGGAGGTGATAGACAAATTTCCTGATTCCATTAGAGAGAGAGTACGAAGTCAGTTTAAAAGTTTATTGGATCCATCTCCTAATTGA 1470 0.4986 MTMTGASLTLVAYSPTFPSSSSSSSSFKSHKPKTSCRVSLSPSPQPLFSSSDPFVLELAETLEDSLPSSTPLLHKLRDASSQSLISTPWPSRKDEPFRFTDLSLIRSSKILPVAHPTKPLSALPTHADDDFPCRLAIVDGHFLQSLSNVPELPQGVYVGSLSGLASSSVMDRVSELVCGLDGGDLFWSINGIGAPDLTVVYVPEGCRVESPIHLVYYAVEGSGEGSKTLPVSNPRVLVVVEKGGEVGIIEEFCSTEGNGNECYWTNSALEAVIREGAKVTHSYIQTQSSSAAHIKWTSIRQESSSKYELTEVSTGGKLSRHNLHIKQLGPDTVTELTTLHLSVGDQTQDLHSSLVLDHPRGYSRQLHKCIVAHSQGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIVADDVKCSHGAAISDLEESQLFYFVARGIDPATARKLLIDAFGGEVIDKFPDSIRERVRSQFKSLLDPSPN* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0189 489 Pfam SUF system FeS cluster assembly, SufBD 232 460 IPR000825 GO:0016226
Lja2g0189 489 Pfam SufBD protein N-terminal region 68 214 IPR045595 -
Lja2g0189 489 PANTHER PROTEIN ABCI7, CHLOROPLASTIC 23 487 IPR011542 GO:0016226
Lja2g0189 489 TIGRFAM sufD: FeS assembly protein SufD 196 475 IPR011542 GO:0016226
Lja2g0189 489 MobiDBLite consensus disorder prediction 16 46 - -
Lja2g0189 489 SUPERFAMILY Stabilizer of iron transporter SufD 68 484 IPR037284 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0189 K09015 - mnt:21406068 597.43