Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0181 ATGGCGTGTAGGGGGTTTTGGGAGTGCCTTTTGAAGCTTTTTAACTTCATAATGACCTTGATTGGTCTCACCATGGTGGGATATGGGATCTATCTGCTGGTTGAATTCATCAAAGCTTCAGGTAGTGATGATGACACACCGGCGGTTTCTCCGGCTAGCGATGATCAAGCCCTAATTCAACTTGGTCGACCGATGCTTTTGGCGGTGTCTCTATCTGAGAGCATTTTTGATAAGTTGCCCAAGGCTTGGTTTATTTACTTATTTATTGGTATTGGAGTAGTTCTCTTTGTTATTTCTTGTTTTGGTTGTATTGGAGCGGGGATGCGGAATGGATGCTGCTTGTGCTGTTATTCGATTCTTGTGGCGTTGTTGATCTTAGTCGAGCTGGGATGTGCAGCCTTTATATTCTTTGACAAAAGCTGGAAAGAAGTAGTTCCATCAGACAAAACTGGAGATTTTGATACGATATATGAATTTCTGAGAGAGAATTGGAATATTGTGAAATGGGTTGCTCTTGGGATTGTTGTCTTTGAGGTCCTTCTTTTCTTGTTAGCCCTTATTGTTAGGGCCTCAAATAGACCAGCAGATTATGATAGTGATGAAGAGTTCATCAATCCAAGGCAGCAAGCTCGGCAGCCATTGCTCAACCGACCAGCAGGTCCAGCAACAGGCCCCCCAGCTTCTGGGACACTTGATCAGCGCCCAAGCAGAAATGATGCATGGAGTACAAGGATGAGGGAGAAGTATGGGCTTGATACTTCAGAATTTACATACAACCCATCCGAGTCACAAAGGTTCCAGCAAGTAAATGCACCTCCAACTGAAGAAAGGAGTCGCTGTACCATCATGTAA 852 0.4425 MACRGFWECLLKLFNFIMTLIGLTMVGYGIYLLVEFIKASGSDDDTPAVSPASDDQALIQLGRPMLLAVSLSESIFDKLPKAWFIYLFIGIGVVLFVISCFGCIGAGMRNGCCLCCYSILVALLILVELGCAAFIFFDKSWKEVVPSDKTGDFDTIYEFLRENWNIVKWVALGIVVFEVLLFLLALIVRASNRPADYDSDEEFINPRQQARQPLLNRPAGPATGPPASGTLDQRPSRNDAWSTRMREKYGLDTSEFTYNPSESQRFQQVNAPPTEERSRCTIM* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0181 283 Pfam Tetraspanin family 9 141 IPR018499 GO:0016021
Lja2g0181 283 MobiDBLite consensus disorder prediction 255 283 - -
Lja2g0181 283 PRINTS Transmembrane four family signature 9 32 - -
Lja2g0181 283 PRINTS Transmembrane four family signature 166 192 - -
Lja2g0181 283 MobiDBLite consensus disorder prediction 214 239 - -
Lja2g0181 283 PANTHER TETRASPANIN/PERIPHERIN-RELATED 2 256 - -
Lja2g0181 283 MobiDBLite consensus disorder prediction 255 275 - -
Lja2g0181 283 PANTHER TETRASPANIN 2 256 IPR018499 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0181 Lja-Chr2 1562638 1567770 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0181 - - gmx:100791911 474.937