Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0170 ATGTCGGCGGCGCAGGTGGATCCGCATGACAAGATGAGGGCAAGGAAGGGGGAAACGCCAGAGGCAGCTGAATCACCAGCTGCCACAAATTACCAAACACGCCACTGTTATGTCAAATATGTGGAGTATCACAGATGCATTCAGCAGAAGGGCGAAAAAGCACCTGAATGTGAGAAACTGGCCACCTATTTTAGGTCCTCTTGTCCAACCGAATGGATTGCAGAATGGGATAGAGAAAGAGCAGAGGGAAGGTTCCCTGGAGAAATATAG 270 0.4963 MSAAQVDPHDKMRARKGETPEAAESPAATNYQTRHCYVKYVEYHRCIQQKGEKAPECEKLATYFRSSCPTEWIAEWDRERAEGRFPGEI* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0170 89 PANTHER CYTOCHROME C OXIDASE SUBUNIT 6B-3-LIKE 23 89 - -
Lja2g0170 89 PANTHER CYTOCHROME C OXIDASE SUBUNIT 6B 23 89 - -
Lja2g0170 89 SUPERFAMILY Cytochrome c oxidase subunit h 27 88 IPR036549 GO:0005739|GO:0045277
Lja2g0170 89 Pfam Cytochrome oxidase c subunit VIb 26 81 IPR003213 GO:0005739|GO:0045277
Lja2g0170 89 ProSiteProfiles Coiled coil-helix-coiled coil-helix (CHCH) domain profile. 33 76 - -
Lja2g0170 89 CDD Cyt_c_Oxidase_VIb 32 87 IPR003213 GO:0005739|GO:0045277
Lja2g0170 89 MobiDBLite consensus disorder prediction 1 28 - -
Lja2g0170 89 Gene3D Cytochrome c oxidase, subunit VIb 8 89 IPR036549 GO:0005739|GO:0045277
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0170 Lja-Chr2 1472418 1473183 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0170 K02267 - gmx:102665439 126.331