Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0165 ATGGCTTCTATAACAAGAAGACATTGTTTCTTGGAAGACGATGAAGAACCTGGCTATTCCGGCCACAACCACTCGCAACCGCAATACCAAAACGGTTTTGTCTCAAGAACTTTGGGCTACGCCACTTTCTACAACAGAGGTCACAGGAACGTGAACGCATCGATGGTTTCTGATTCTAGATCTGGAAGGTTTTACGATGCCAGATTCGAAGGTCATCAACCGCACTTTCTCGAAGCTTGTCATCTCTGCAATAAGCCTCTTGGAAACAAAGACATCTACATGTACAGAGGGGACACGCCATTTTGCAGCGAAGAGTGCAGGCTAGAGCAAATAGAGATGGATGAAGCGAAGGAGAAGAATAGGAACCTATCTTCTTCGATGAAGGCTATGAGGAAAAAGGAACAGAGTAAATCTGGTTCTCCAAACAAGGCTCAGGATTACTCTTATCGTACAGGGACTGTTGTTGCTGCTTAG 474 0.4515 MASITRRHCFLEDDEEPGYSGHNHSQPQYQNGFVSRTLGYATFYNRGHRNVNASMVSDSRSGRFYDARFEGHQPHFLEACHLCNKPLGNKDIYMYRGDTPFCSEECRLEQIEMDEAKEKNRNLSSSMKAMRKKEQSKSGSPNKAQDYSYRTGTVVAA* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0165 157 Pfam zinc-finger of the FCS-type, C2-C2 68 117 IPR007650 -
Lja2g0165 157 ProSiteProfiles Zinc finger FLZ-type profile. 75 118 IPR007650 -
Lja2g0165 157 PANTHER FCS-LIKE ZINC FINGER 1-RELATED 51 157 IPR044533 -
Lja2g0165 157 MobiDBLite consensus disorder prediction 116 157 - -
Lja2g0165 157 PANTHER FCS-LIKE ZINC FINGER 1-RELATED 51 157 - -
Lja2g0165 157 MobiDBLite consensus disorder prediction 116 139 - -
Lja2g0165 157 Coils Coil 113 133 - -
Lja2g0165 157 Gene3D - 76 139 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0165 Lja-Chr2 1366298 1367542 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0165 - - gmx:100797178 228.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0165 2 1366298 1367542 Lja2g0165 2 1366298 1367542 ECH