Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0149 ATGGTTCAATTCCAGGAGCACATAATCACAGAGCTTCTAGAAGACTCCAATGGCGGTCTCGTCATCCTCTCTTCCGGCCTCTCTCTCTCGAAACTCATCTCCTCTCTCCTCCTTCTCCACTCCTCTTCTCAAGGCACACTCCTCCTTCTCTCTCCTTCTTCCACCACTCTCAAATCCAAAATCAACTTCCACCTCAAAACCCTAAACCCCCAATTCTACCAAATCCCCTCCGAAATCACCGCCGATCTCCCCGCCCACCACCGCCACTCCCTCTACACCTCCGGCAACGCCTTCTTCATCACCGCTAGGATCCTCATCGTCGACCTCTTAACCAACAGACTCCCTACCTCCAAAATCGCCGGGATCGTCCTCCTCAACGCGCATTCCATCTCCGAGACTTCCACTGAAGCGTTCATTGTTAGAATCTTCCGGTCACTCAATCGCGATGCGTACGTCCGTGCTTTCTCTGATAAGCCTCACGCGATGGTATCAGGTTTCGCGAAGGCGGAGAGGACCATGAAGTGTTTGTTCCTGCGGAGGCTGCATCTCTGGCCGAGGTTTCAGGTGTATGTGTCGCAGGAATTGGAGAGGGACCCGCCGGATGTGGTGGATATAAGGGTGCCGATGACTAGGTATATGGTGGGGATTCAGAAGGCTATTATTGAGGTCATGGACGCGTGCTTGAAGGAGATGAGGAAGACCAATAAGGTTGACATTGAGGATTTGACGGTGGAGAATGGCTTGTTCAAGTCATTTGATGAGATTGTGAGGAGGCAGTTGGATCCAATTTGGCATACTTTGGGGAAAAAGACTAAGCAGCTTGTTTCGGACCTTAAGACCTTGAGGAAATTGTTGGATTATCTAGTCAGGTATGATGCAGTAACTTACTTGAAATATTTGGATACACTGAGAGTGTCGGAGAGTTTTCGATCTGTTTGGATATTTGCAGAGGCGAGCTATAAGATATTTGACTATGCAAAGAAACGTGTTTTCCACCTTGTGAGGTCAGACGGTACGAAATTAAATGGGCAGAGTAAGGGTGGAAAAAACAAGAAGAAAAAAGTTAAAGGGGATAACAAAGACACTGAAGAAGTTGACGGTACTTCATCAGCTAGTTCAAATGCTGGCTTAGTTTTGGAGGAAGTATTGGAAGAAGCGCCGAAATGGAAGGTCTTACGTGAGGTTCTGGAGGAGGTAGAAGAAGAAAGACAAAAGCAAGGTACATTGAGAGAAGAAGTATTGGCTGAAGGTGAAGACACCGACAATGGCATTGTATTAGTGGCATGCAAAGATGAAATGTCGTGCTTGCAGCTTGAAGAATGCATCACCAACAGTCCCAAAAAGGTCATGCGTGAAGAATGGGCGAAGTACTTGCTAAACAAAGTACAGCTGCGTGACATAGTGCATAAGAAAAAGAAGCCAAAGGATCCTAAAGGTTTTGGTATTCTTGATGGAGTTACTCCGATTGCACCTGCTCAGAAAATGGAAACCAGCACCATTAATAAGCAGGAGCATGATGCACTTCTGGCTGCGGCATCAGAACTAAAAAAGCGTGTCGAAAATGTTCATGTTGTTGAAGATACTCTTCAGCCTGATTTTAGTGGACAGGTTCGCTCAAAAGGAAAAAGAAAATTGGGGAATAGAAATAGCCCAATCATTGTTGATGGCTTGGGAGCTCAGACTGATAATAAAGACGCATCAACAAGTGAGAAAACTGGGATGTCTGTGGACAACATGGTTCTTCGAAGGCATACTAATCCTGATTCGGCATCAGGAAGTGGGAAGCCACTACCACCAGTACATTTTTATGCCCTAGAAAGTGACCAGCCTGTTTTGGACATATTAAAGCCCTCTATAATCATTGTTTACCATCCAGACATGGCCTTTGTTCGGGAAATTGAAGTTTACAAAGCTGAGAATCCCTCAAAAAGGTTGAAGGTATATTTTATTTTCTATGAAGATTCCACTGAGGTTCAGAAGTTTGAGGCAAGTATACGTAGAGAGAATGGAGCATTTGAATCTTTGATCAGGCAAAAATCTATGATGATGATTCCAGTTGACCAGGGTGGGCATTGTTTAGGACTGAATTCTACTTTAGAGGCAGATTTAAATACTCCTCAGAACTCAATAACCAGAAAAGCGGGTGGGAGAAAGGAGGTTGATAAAGACATGCAGGTCATTGTGGACATGCGGGAGTTCATGAGCAGCCTTCCAAATGTTCTTCATCAAAAGGGAATGCGCATAATTCCAGTGACCCTAGAAGTTGGTGACTACATCCTATCACCATTAATTTGTGTGGAAAGAAAAAGTATTCAAGATCTGTTTATGAGCTTCACATCAGGTCGTCTATACCACCAGGTGGAGACAATGGTGCGATATTATAGAATACCTGTGCTCTTGATTGAGTTTTCACAGGATAAAAGCTTTTCGTTCCAGTCTGCTAGTGATATTGGTGACGATGTGACACCCAATAGCATTATATCGAAGTTGTCATTGCTTGCTCTACACTTTCCCCGGCTACGAATAATCTGGTCTAGAAGTTTGCATGCCACTGCTGAAATATTTGCTTCACTGAAGGCAAATCAAGATGAACCAGATGAGACAAAGGCAATGAGAGTGGGTGTCCCCTCAGAAGAAGGAATTGTGGAAGATGATGTGAGGGCTGAAAATTACAACACGTCGGCTGTGGAGTTTCTAAGACGACTTCCAGGTGTGACAGATTCGAACTACAGGGCCATAATGGACGGGTGTACGAGCTTGGCAGAACTTGCACTTCTTCCTCTAGAGAAGCTGGCTGAATTAATGGGTGGTCATAAAGCTGCTCGGACTCTTAGAGAATTTCTCGATGCTAAATATCCAACTTTGTTGTGA 2871 0.4472 MVQFQEHIITELLEDSNGGLVILSSGLSLSKLISSLLLLHSSSQGTLLLLSPSSTTLKSKINFHLKTLNPQFYQIPSEITADLPAHHRHSLYTSGNAFFITARILIVDLLTNRLPTSKIAGIVLLNAHSISETSTEAFIVRIFRSLNRDAYVRAFSDKPHAMVSGFAKAERTMKCLFLRRLHLWPRFQVYVSQELERDPPDVVDIRVPMTRYMVGIQKAIIEVMDACLKEMRKTNKVDIEDLTVENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRSVWIFAEASYKIFDYAKKRVFHLVRSDGTKLNGQSKGGKNKKKKVKGDNKDTEEVDGTSSASSNAGLVLEEVLEEAPKWKVLREVLEEVEEERQKQGTLREEVLAEGEDTDNGIVLVACKDEMSCLQLEECITNSPKKVMREEWAKYLLNKVQLRDIVHKKKKPKDPKGFGILDGVTPIAPAQKMETSTINKQEHDALLAAASELKKRVENVHVVEDTLQPDFSGQVRSKGKRKLGNRNSPIIVDGLGAQTDNKDASTSEKTGMSVDNMVLRRHTNPDSASGSGKPLPPVHFYALESDQPVLDILKPSIIIVYHPDMAFVREIEVYKAENPSKRLKVYFIFYEDSTEVQKFEASIRRENGAFESLIRQKSMMMIPVDQGGHCLGLNSTLEADLNTPQNSITRKAGGRKEVDKDMQVIVDMREFMSSLPNVLHQKGMRIIPVTLEVGDYILSPLICVERKSIQDLFMSFTSGRLYHQVETMVRYYRIPVLLIEFSQDKSFSFQSASDIGDDVTPNSIISKLSLLALHFPRLRIIWSRSLHATAEIFASLKANQDEPDETKAMRVGVPSEEGIVEDDVRAENYNTSAVEFLRRLPGVTDSNYRAIMDGCTSLAELALLPLEKLAELMGGHKAARTLREFLDAKYPTLL* 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0149 956 Gene3D - 883 954 - -
Lja2g0149 956 PANTHER DNA REPAIR ENDONUCLEASE XPF 2 952 - -
Lja2g0149 956 SUPERFAMILY RuvA domain 2-like 887 951 IPR010994 -
Lja2g0149 956 Pfam ERCC4 domain 728 857 IPR006166 GO:0003677|GO:0004518
Lja2g0149 956 SUPERFAMILY Restriction endonuclease-like 722 860 IPR011335 -
Lja2g0149 956 MobiDBLite consensus disorder prediction 341 372 - -
Lja2g0149 956 SMART ERCC4_2 725 805 IPR006166 GO:0003677|GO:0004518
Lja2g0149 956 MobiDBLite consensus disorder prediction 533 571 - -
Lja2g0149 956 Gene3D - 725 871 - -
Lja2g0149 956 Coils Coil 392 416 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0149 K10848 - gmx:100812359 1536.55