Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0142 ATGACTGCAACTCCACTCATTTCTGTTAATCCCGACGAGCTCAGGTTCAATTTTGAGCTTGAGAAGCAAACATTTTGCGATCTTAAGGTCCTCAACAACACGCAGAACTATGTCGCTTTCAAGGTCAAAACCACATCCCCTAAGAAGTACTTTGTACGACCAAACACCGGTGTTGTACAGCCCTGGGACTCATGTATCATCAGAGTGACCCTCCAAGCCCAACGTGAATTCCCTCCAGATATGCAATGTAAAGACAAGTTTCTCTTACAGAGTACTATAGTCAATCCAAATACTGATGTTGATGACCTTCCACCAGATACTTTTAGTAAGGATAGTGGTAATTCAATAGAGGAGTTGAAACTACGAGTTGCATATATCACGCCTACCTCACCTGATGGAAGCTCTGAAGAGGATGGTTTGAAGAACTCCGCACAAAAACTTGGTACCTCTTCTAGCCAGGCTTTAGAGCAACTAAAAGAAGAAAGAGATGTCGCTGCAAGACAAACGCGAATGCTGCAACAGGAACTGGACATGCTGAAAAGGCAAAGAAACCGAAGAGGTGGCGGCGATCCTGGCTTTTCCTTCACTTTTGCTGTTTTTGTGGGTCTCCTTGGACTTTTGCTTGGCTTTCTTTTGAAACTTCTATTCTCTTCACCATCTTCAGAATGA 669 0.4365 MTATPLISVNPDELRFNFELEKQTFCDLKVLNNTQNYVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQAQREFPPDMQCKDKFLLQSTIVNPNTDVDDLPPDTFSKDSGNSIEELKLRVAYITPTSPDGSSEEDGLKNSAQKLGTSSSQALEQLKEERDVAARQTRMLQQELDMLKRQRNRRGGGDPGFSFTFAVFVGLLGLLLGFLLKLLFSSPSSE* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0142 222 Coils Coil 155 182 - -
Lja2g0142 222 MobiDBLite consensus disorder prediction 128 155 - -
Lja2g0142 222 Pfam MSP (Major sperm protein) domain 7 107 IPR000535 -
Lja2g0142 222 PIRSF VAMP_assoc_prot 133 214 IPR016763 GO:0005789
Lja2g0142 222 PIRSF VAMP_assoc_prot 1 154 IPR016763 GO:0005789
Lja2g0142 222 PANTHER VESICLE-ASSOCIATED PROTEIN 2-1 3 219 - -
Lja2g0142 222 Gene3D Immunoglobulins 2 130 IPR013783 -
Lja2g0142 222 MobiDBLite consensus disorder prediction 127 155 - -
Lja2g0142 222 SUPERFAMILY PapD-like 4 138 IPR008962 -
Lja2g0142 222 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 3 219 IPR016763 GO:0005789
Lja2g0142 222 ProSiteProfiles Major sperm protein (MSP) domain profile. 1 126 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0142 Lja-Chr2 1171940 1177061 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0142 - - aprc:113869624 337.806