Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0141 ATGGCTTCTCAAGTTTTTCTTCAGCAAGGGTTGTTACTGTTTGCCCCAAACCAATGTTCTCCAACCAAGCTCGGTGTATCTTCTTGCCTCGGTTCTCGTAACTTTCCGTTGATTTCCTCCACCTCAATTTCATGGCGTTGCAACAACCCTCTCTCTGCCAAACCCTCTTTTGTTGTCAGAGCTGACTCCAATGTCGACGCTGCTTCCGACAATGCTGGTGAAGTTCCAGAAGCTGAAGGTAGCGTTGATCAGGTTCCTGAAGATGGAGAAGCAGAACTAGCTTCGGATTCTGAGGTGGAGCAACCCAAGCCCCCTAGAAAGCAACGAGTCAAGCTTGGAGATGTTATGGGGATATTGAATCAGAGGGCAATTGAGGCATCGGAAAGCATGAGGCCGACTCCAGAAATTAGGACTGGAGATGTTGTGGAAATCAAACTGGAAGTTCCTGAGAACAAGCGTAGGTTGTCTATTTATAAAGGTATAGTCATCTCAAGACAAAATGCTGGTATTCACACAACTATTCGAATCCGAAGGATTATTGCTGGCACAGGGGTTGAGATTGTCTTCCCAATTTACTCACCAAACATCAAAGAAATCAAAGTGGTAAACCACCGTAAAGTCAGAAGAGCAAGATTGTACTATTTAAGAGACAAGCTTCCCAGATTCTCCACTTTCAAATGA 681 0.4479 MASQVFLQQGLLLFAPNQCSPTKLGVSSCLGSRNFPLISSTSISWRCNNPLSAKPSFVVRADSNVDAASDNAGEVPEAEGSVDQVPEDGEAELASDSEVEQPKPPRKQRVKLGDVMGILNQRAIEASESMRPTPEIRTGDVVEIKLEVPENKRRLSIYKGIVISRQNAGIHTTIRIRRIIAGTGVEIVFPIYSPNIKEIKVVNHRKVRRARLYYLRDKLPRFSTFK* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0141 226 Gene3D - 106 225 IPR038657 -
Lja2g0141 226 SUPERFAMILY Translation proteins SH3-like domain 123 226 IPR008991 -
Lja2g0141 226 Pfam Ribosomal protein L19 123 219 IPR001857 GO:0003735|GO:0005840|GO:0006412
Lja2g0141 226 MobiDBLite consensus disorder prediction 81 95 - -
Lja2g0141 226 PANTHER RIBOSOMAL PROTEIN L19 19 226 IPR001857 GO:0003735|GO:0005840|GO:0006412
Lja2g0141 226 TIGRFAM rplS_bact: ribosomal protein bL19 124 218 IPR001857 GO:0003735|GO:0005840|GO:0006412
Lja2g0141 226 MobiDBLite consensus disorder prediction 68 107 - -
Lja2g0141 226 PRINTS Ribosomal protein L19 signature 179 202 IPR001857 GO:0003735|GO:0005840|GO:0006412
Lja2g0141 226 PRINTS Ribosomal protein L19 signature 120 149 IPR001857 GO:0003735|GO:0005840|GO:0006412
Lja2g0141 226 PANTHER 50S RIBOSOMAL PROTEIN L19-1, CHLOROPLASTIC-RELATED 19 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0141 Lja-Chr2 1167507 1170070 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0141 K02884 - gmx:100305649 276.944