Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0139 ATGGCTACAACAACAACGACAACCTCGTCTTTTGTTTTTCTGAAATCTCCTGCCTCAACATTTCTCATGCACAATGATCATTTTCGTTATGGAAATGGAGCCCGGAGAAGGAGAAGTTCCAAACCCATCATCATCAAGGCTCAATCTGAGGTCAGAAAAGAACATGTAGTCATCGTGGGTGGTGGAATCGCAGGACTCGCAACTGCTCTATCACTTCACAGGCTTGGGGTTCGGTCCCTGGTGCTGGAACAGGCAGAGTCTCTTCGAACCGGTGGAACTTCACTCACCCTTATGAAGAACGGGTGGAGGGTGCTTGATGCAATCGGAGTAGCTAATGAACTTAGACCTCAATTCTTGGAAATTCAAGGGATGGTGGTGAAAACCGAGGACGGGAGGGAACTACGCTCCTTCAATTTCAAAGAAGAGGATCAAAGCCAAGAGGTGCGTGCAGTGGAGAGGAGAGTACTCTTGGAAACCTTGGCTGGTCACCTCCCTCAGGATACGATTCAATATTCTTCACGGCTAGCAAGCATTGAAGCAACTCCAAACGGGGATACCTTATTGGAACTGGTTGATGGATCTAAGCTGCTTGCAAAGATTGTGATAGGGTGTGATGGGATTCGATCACCAATAGCCAAGTGGATGGGGTTTCCTGAGCCTAAGTATGCTGGTCACTGTGCTTTCCGTGGACTTGCATCTTACCCAGATGGACAACCTTTTGGACCAAGAGTGAACTACATCTATGGAAGAGGGTTACGTGCTGGATATGTTCCTGTTTCTCCAACCAAAGTTTACTGGTTTATCTGCTTCAACAGTCCATCTCCAGGTCCAAAAATAACAGATGCATCAGTGCTCAAGAATCAAGCTAAGGAACTAGTCAGGAACTGGTCTTCAGAGCTATTAAACATAATGGATTCTACACCAGATGACACTATCATTAGGACTCCATTGGCGGATCGATGGCTTTGGCCATCCATAACTCCACCTGCTTCTGCAGGCAGGGTTGTGGTGGTTGGAGACGCGTGGCACCCAATGACTCCGAATCTCGGCCAAGGAGCTTGTTGTGCGCTCGAGGATGCAGTGGTTCTCGCTAAAAAGCTCGCCTTAGCCATCAAGTCTGAAGACCCTTCTTCTGTGGAAGGAGCTTTGATGTCCTATGGCTCTGAAAGATGGTCTCGAGTGTTTCCACTAACTGTGCGTGCATACCTTGTGGGTTCCGTTTTGCAGTGGGGGAACCCATTGGTGTGTTCTGTTAGGAACAACATTGTCTTGCCTAAGCTAGTCAAGCTAGGACCGATGCTGGAGCATACAAATTTTACATGTGAGAGTCTATAA 1335 0.4764 MATTTTTTSSFVFLKSPASTFLMHNDHFRYGNGARRRRSSKPIIIKAQSEVRKEHVVIVGGGIAGLATALSLHRLGVRSLVLEQAESLRTGGTSLTLMKNGWRVLDAIGVANELRPQFLEIQGMVVKTEDGRELRSFNFKEEDQSQEVRAVERRVLLETLAGHLPQDTIQYSSRLASIEATPNGDTLLELVDGSKLLAKIVIGCDGIRSPIAKWMGFPEPKYAGHCAFRGLASYPDGQPFGPRVNYIYGRGLRAGYVPVSPTKVYWFICFNSPSPGPKITDASVLKNQAKELVRNWSSELLNIMDSTPDDTIIRTPLADRWLWPSITPPASAGRVVVVGDAWHPMTPNLGQGACCALEDAVVLAKKLALAIKSEDPSSVEGALMSYGSERWSRVFPLTVRAYLVGSVLQWGNPLVCSVRNNIVLPKLVKLGPMLEHTNFTCESL* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0139 444 Gene3D - 55 409 IPR036188 -
Lja2g0139 444 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 38 442 IPR044560 -
Lja2g0139 444 Pfam FAD binding domain 55 391 IPR002938 GO:0071949
Lja2g0139 444 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 38 442 - -
Lja2g0139 444 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 197 212 - -
Lja2g0139 444 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 55 77 - -
Lja2g0139 444 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 332 347 - -
Lja2g0139 444 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 347 363 - -
Lja2g0139 444 SUPERFAMILY FAD/NAD(P)-binding domain 55 422 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0139 Lja-Chr2 1154549 1158376 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0139 54 444 Miscellaneous Gene Families AT5G05320 35.396 3.54e-78 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0139 - - gmx:100787671 690.649