Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0138 ATGATGCAAATCAGCTCCACCATGCCCGCTCACAACCTTCAAAAGTTTCAAGGACTTAGATGCCCCAGCTTCAGGTGCAGCAGAGCCTCTCCCCTCAAACCTTCCACCATGAAACGCCCCATAACCTTCTCTTCCCTCCATGTCCAGAACCCCACCACCGATTCCACTCGTTTGCACCTCGCAAACCTCGACAAGATCCTCGGCAACCAGAAGCCGATGTTATCCACACAGCACCACCAACCCCCACCACAACCCATTGAGTCAAAAGACAAGAAGGGAAGGAGCTTTTTTGACAACCTCAACCTGGCTCGCCTCTGGCCGGAGATGAAAGGCGCAGCGGAGGAAATGTCCCCGCACCACCTCAACCGCCTCCAGCGCCTCCTCTCCATGACGTCGGAGTATTCCCCGAGAAACATCCTCAGCGGCCGGTGGAAGGAGTACCACGGCAGCAACAACTGGAAAGGGATGCTTGATCCCCTCGACGAGAATCTTCGCCGAGAGGTCGTCAGGTACGGCGAGTTCGTACAGGCGGCGTACCAAGCCTTCCATGCTGACCCTGCCATGTCCACGACAGAGGCCCCACACCCCCGCCATGTCCCGCTGCCAGACGCGTCCTATACTGTGACCAAGTCCCTCTACGCCACGTCATCAATTGGGTTGCCTAACTGGGTTGATGAAGTGGCACCGGATCTCGGGTGGATGACCCAGCGATCCAGCTGGGTCGGGTACGTCGCGGTTTGCGAGGATAAGAGAGAGATCGCGAGGCTCGGACGGAGGGACATCGTGATATCCCTCCGCGGAACCTCCACGTGTCTTGAATGGGCCGAGAATCTTAGGGCCCAATTGATCGATATTGGCGGTGAAGGCGAACATGACAATTCCACGGCCCATGGAAAGCCCAAAGCAGAGTGTGGGTTTTTGAGCCTGTATAAGACCAAAGGCGCACACGTGCAAAGCCTATCTGAATCAGTAGTGGAAGAAATTAGGCGTCTTGTTAATCTCTACAAAGGTGAGGAACTCAGCATAACCGTCACAGGCCACAGCCTGGGTGCCACTCTAGCATTACTAGTGGCTGATGATATAAGCACTTGTTGCCCAGATGTCCCACCGGTGGCAGTTTTCTCCTTCGGTGGGCCTCGGGTGGGCAACAAGGCCTTCGGGGACCGCCTCATGGCGAAGAATGTCAAAGTTTTGCGAATTGTGAACTCGCAAGATGTGATCACAAGGGTGCCTGGGAATTTTCTCAGCGAGGAGGTTGAAGAGAAGATCAGGAAGTCAAATGTGGGTGGTGGTGTGTTGAGCATGCTGGAAGAGAACACGCCGCTGGGTGCGTACTCGCATGTGGGAGCGGAGTTGCGGGTGCACACGAAGATGTCACCGTACTTGAAGCCTGATGCTGACATGGCGTGCTGCCATGACTTGGAGGCTTACCTTCATCTGGTGGATGGGTTTTTGGCTTCTAATTGTCCCTTCCGAGCAAATGCAAAGAGGAGCTTGAAAAGGTTAATGCAAGACCAGAGCTCTAATGTGAAGAAGTTGTATACAAGCAGGGCAAAGGCCTTAACTGTGAATCTTAGTAATCAGGGATCCATGTCTATGTCTAGATCCATGTCTATTTCTACTCGTTTACCTAGTCCATCTTAA 1644 0.5371 MMQISSTMPAHNLQKFQGLRCPSFRCSRASPLKPSTMKRPITFSSLHVQNPTTDSTRLHLANLDKILGNQKPMLSTQHHQPPPQPIESKDKKGRSFFDNLNLARLWPEMKGAAEEMSPHHLNRLQRLLSMTSEYSPRNILSGRWKEYHGSNNWKGMLDPLDENLRREVVRYGEFVQAAYQAFHADPAMSTTEAPHPRHVPLPDASYTVTKSLYATSSIGLPNWVDEVAPDLGWMTQRSSWVGYVAVCEDKREIARLGRRDIVISLRGTSTCLEWAENLRAQLIDIGGEGEHDNSTAHGKPKAECGFLSLYKTKGAHVQSLSESVVEEIRRLVNLYKGEELSITVTGHSLGATLALLVADDISTCCPDVPPVAVFSFGGPRVGNKAFGDRLMAKNVKVLRIVNSQDVITRVPGNFLSEEVEEKIRKSNVGGGVLSMLEENTPLGAYSHVGAELRVHTKMSPYLKPDADMACCHDLEAYLHLVDGFLASNCPFRANAKRSLKRLMQDQSSNVKKLYTSRAKALTVNLSNQGSMSMSRSMSISTRLPSPS* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0138 547 SUPERFAMILY alpha/beta-Hydrolases 165 484 IPR029058 -
Lja2g0138 547 Pfam Lipase (class 3) 262 413 IPR002921 GO:0006629
Lja2g0138 547 PANTHER GLYCEROLIPASE A1 2 527 - -
Lja2g0138 547 Gene3D alpha/beta hydrolase 143 537 IPR029058 -
Lja2g0138 547 MobiDBLite consensus disorder prediction 73 92 - -
Lja2g0138 547 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 2 527 - -
Lja2g0138 547 CDD Lipase_3 197 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0138 Lja-Chr2 1149209 1151595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0138 50 547 Acyl Lipid Metabolism Gene Families AT4G16820 58.600 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0138 - - gmx:100806573 810.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0138 2 1149209 1151595 Lja5g0467 5 4116433 4122375 PCT