Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0101 ATGGCGGGAGCAATTGGATCGACAGCAGCATCATGTATATTCTGTGATATAGCAACCAAATCCAGCTCCAATACTCTTCTCCACTCTGACGATAGGGTTGTTGCGTTTCGGGACATCAATCCATCTGCTTTCAGGCATTACTTGGTAGTTCCTGTTGAGCACATTCCTACTGTTAAAGATCTGCAAAGAAAAACTGAAGACTATTCTCTAGTGAGTCACATGTTAGAGGTGGGGAGAGTTTTATTACTCAGAGATGCACCTCAGTCCAAGATGTACAGATTTGGTTTTCATCAGCCTCCATTGAACTCTGTTAACCACCTACACCTTCATTGTTTGGCACTACCATATACACCCAAATGGAGATGTATAAAATACTTGTCTTTTGGACCACTTGGTTTCATTGAAGCAGAGAAGTTTCTGGAAAAGATAAAGCCTTTGCCCACAATTCATTCAAAAGTATAA 462 0.4091 MAGAIGSTAASCIFCDIATKSSSNTLLHSDDRVVAFRDINPSAFRHYLVVPVEHIPTVKDLQRKTEDYSLVSHMLEVGRVLLLRDAPQSKMYRFGFHQPPLNSVNHLHLHCLALPYTPKWRCIKYLSFGPLGFIEAEKFLEKIKPLPTIHSKV* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0101 153 ProSiteProfiles HIT domain profile. 13 121 IPR011146 GO:0003824
Lja2g0101 153 PANTHER APRATAXIN-RELATED 7 144 - -
Lja2g0101 153 PRINTS Histidine triad family signature 13 29 IPR001310 -
Lja2g0101 153 PRINTS Histidine triad family signature 34 52 IPR001310 -
Lja2g0101 153 PRINTS Histidine triad family signature 102 112 IPR001310 -
Lja2g0101 153 SUPERFAMILY HIT-like 9 141 IPR036265 -
Lja2g0101 153 Pfam Scavenger mRNA decapping enzyme C-term binding 11 120 - -
Lja2g0101 153 PANTHER HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN 3 7 144 - -
Lja2g0101 153 Gene3D - 4 117 IPR036265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0101 Lja-Chr2 781952 783810 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0101 K22966 - gmx:100799719 249.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0101 2 781952 783810 Lja2g0101 2 781952 783810 ECH