Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0097 ATGAGCACTGGCTACCTTCTCCGCATTGATCCTCTCGAACTCAAGTTCACCTTTCAGCTGAAGAAGCAGATCTCATGCTCTCTTCAATTAACAAATAAGACTGATGAATATGTTGCTTTCAAGGTGAAAACGACAAATCCTAAGAAGTATTGTGTTCGTCCAAACACTGGGGTTGTCTTGCCGCGTTCTACATGTGATGTTAAAGTTACCATGCAAGCGCAGAAGGAAGCTCCGCCAGATATGCAATGCAAGGATAAGTTTCTTCTTCAATGCGTAAAAGTAAATGATGGGGTCTCCCCAAAGGACATCACTGCAGAAATGTTCAACAAGGAATCAGGGCACGTGGTTGAAGAATCCAAATTGAGAGTGGTGTATGTCTCTCCACCTCAACCTCCGTCTCCAGTTGCGGAAGGTTCTGAGGAAGGCTCATCGCCCAGAGGTTCTGTTTCTGAAAACGGAAATGTCAATGTCTCAGACTCAGCAACAATTGCCAGAGGATTTACTGAAAGACATGAGGCTACAGATAAATCTGCAGAGGCAAAAGCTCTTATCACGAGGCTGACTGAAGAAAAGAGTAATGCAATTCAACAAACTAACAAGCTTCGACAGGAATTGGACCTGCTGAGACGTGAGAGCAACAAAAATCGTGGGGGTGTCTCAATGCTCATTGTCATATTAGTTGGTTTACTTGGCATAGTTATGGGGTATCTGATGAAGAAGACCTAA 726 0.438 MSTGYLLRIDPLELKFTFQLKKQISCSLQLTNKTDEYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVKVTMQAQKEAPPDMQCKDKFLLQCVKVNDGVSPKDITAEMFNKESGHVVEESKLRVVYVSPPQPPSPVAEGSEEGSSPRGSVSENGNVNVSDSATIARGFTERHEATDKSAEAKALITRLTEEKSNAIQQTNKLRQELDLLRRESNKNRGGVSMLIVILVGLLGIVMGYLMKKT* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0097 241 Pfam MSP (Major sperm protein) domain 7 111 IPR000535 -
Lja2g0097 241 Gene3D Immunoglobulins 2 130 IPR013783 -
Lja2g0097 241 Coils Coil 170 211 - -
Lja2g0097 241 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Lja2g0097 241 MobiDBLite consensus disorder prediction 143 160 - -
Lja2g0097 241 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 239 IPR016763 GO:0005789
Lja2g0097 241 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-LIKE 1 239 - -
Lja2g0097 241 MobiDBLite consensus disorder prediction 126 160 - -
Lja2g0097 241 SUPERFAMILY PapD-like 2 141 IPR008962 -
Lja2g0097 241 PIRSF VAMP_assoc_prot 1 240 IPR016763 GO:0005789
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0097 Lja-Chr2 753542 761425 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0097 - - gmx:100527687 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0097 2 753542 761425 Lja2g0097 2 753542 761425 ECH