Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0085 ATGCCAATCAAATTCATCATGTCCACCGCACCCCCACTTCTCACGCCGCGCCACGTCGCAGTAATCGGCGCCGGCGCGGCGGGTCTGGTAGCAGCGCGCGAGCTCCGGCGAGAAGGTCACCGGGTGGTTGTTTTCGAGCAAGGGGAGCAAGTGGGTGGCACGTGGGTGTACACTCCGGAGGTGGAATCGGACCCTCTCGGTCAGGACCCGAAGCGGAGGATTATCCAATCGAGCATGTACGAGTCGCTCCGAACGAATCTGCCTCGGGAGAGCATGGGGTTCAGAGATTACCCGTTCGTGAGGAAAGATGGGAAGGAGAGGGATCCGAGAAGGTACCCGGGTCACAGAGAGGTGTTGATGTATTTGAAGGATTTTGCTGCGGATTTTGAGATCGATGGTGAATTGGTGAGGTTTCAGACGGAGGTGGTGTTTGCTGGGTTGGGTGAGACTGGAAAATGGAGGGTCACATCGAGATCATCCAATGACAGTGATTGTGTGGATGAGATTTATGACGCTGTGGTTGTTTGCAATGGACATTACGCTCAGCCACGACTCGCTCATATCCCAGGCATTGATGCATGGCCAGGGAAGCAGATGCATAGCCATAATTATAGGACACCTGAGCCATTTCAACATCAAGTTGTAGTTCTAATAGGTAGTGCTGCTAGTGCGGTTGATATCTCTCGAGAAATCGCAACGGTAGCTAAAGAAGTCCACATTGCAGCTCGGTCAGTTGAAGAAGATAAACTTGGAAAGGTTCCTGGCCATGATAATCTGTGGCTTCATTCTATGATTGACAGTGTTCATGAAGATGGGAAAGTGGTTTTCCAAGATGGAAGTGCAATTGCTGTAGACTGCATTTTACATTGCACAGGGTACAAGTATGATTTTCCATTCCTTGAAACCGAAGGCTTGGTGACTGTAGATGACAATCGGGTAGGACCATTGTACCAACATGTTTTTCCACCAGCGTTAGCTCCATGGCTTTCATTTGTTGGGTTGCCTTGGAAGGTTATTCCTTTCCCCTTGTGCGAACTGCAAAGCAAGTGGATAGCTAGTATCTTGTCTAATCGCATTGCCCTTCCTTCTCAAGAGGAGATGGCTAAAGATATTGAAGCATTTTACGTGTCCCTTGAAGCATCTGGCACTCCTAAGAGCTACACTCATAACTTGGCCTTTGTTCAGTGGGACTACAATAACTGGATTGCGGATCAGTGTGGGGTTCCTGCAGTTGAAGAATGGAGAAAGCAAATGTACAAGGCCGCGTCTAAGAGCAAGCTCGTGCGACCTGAATCTTACCGTGACGAGTGGGATGACGATGACATTGTTCTACTAGCTCAGCAGGATTTTGCCAATTATTTGAGAGAATGA 1371 0.4916 MPIKFIMSTAPPLLTPRHVAVIGAGAAGLVAARELRREGHRVVVFEQGEQVGGTWVYTPEVESDPLGQDPKRRIIQSSMYESLRTNLPRESMGFRDYPFVRKDGKERDPRRYPGHREVLMYLKDFAADFEIDGELVRFQTEVVFAGLGETGKWRVTSRSSNDSDCVDEIYDAVVVCNGHYAQPRLAHIPGIDAWPGKQMHSHNYRTPEPFQHQVVVLIGSAASAVDISREIATVAKEVHIAARSVEEDKLGKVPGHDNLWLHSMIDSVHEDGKVVFQDGSAIAVDCILHCTGYKYDFPFLETEGLVTVDDNRVGPLYQHVFPPALAPWLSFVGLPWKVIPFPLCELQSKWIASILSNRIALPSQEEMAKDIEAFYVSLEASGTPKSYTHNLAFVQWDYNNWIADQCGVPAVEEWRKQMYKAASKSKLVRPESYRDEWDDDDIVLLAQQDFANYLRE* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0085 456 PRINTS Flavin-containing monooxygenase (FMO) signature 199 213 IPR000960 GO:0050660|GO:0050661
Lja2g0085 456 PRINTS Flavin-containing monooxygenase (FMO) signature 17 33 IPR000960 GO:0050660|GO:0050661
Lja2g0085 456 PRINTS Flavin-containing monooxygenase (FMO) signature 226 241 IPR000960 GO:0050660|GO:0050661
Lja2g0085 456 PRINTS Flavin-containing monooxygenase (FMO) signature 277 304 IPR000960 GO:0050660|GO:0050661
Lja2g0085 456 PRINTS Flavin-containing monooxygenase (FMO) signature 342 355 IPR000960 GO:0050660|GO:0050661
Lja2g0085 456 PRINTS Flavin-containing monooxygenase (FMO) signature 41 65 IPR000960 GO:0050660|GO:0050661
Lja2g0085 456 Gene3D - 19 436 IPR036188 -
Lja2g0085 456 Pfam Flavin-binding monooxygenase-like 263 374 IPR020946 GO:0004499|GO:0050660|GO:0050661
Lja2g0085 456 Pfam Flavin-binding monooxygenase-like 17 244 IPR020946 GO:0004499|GO:0050660|GO:0050661
Lja2g0085 456 SUPERFAMILY FAD/NAD(P)-binding domain 15 244 IPR036188 -
Lja2g0085 456 Gene3D - 187 290 IPR036188 -
Lja2g0085 456 PANTHER FLAVIN-CONTAINING MONOOXYGENASE 13 453 - -
Lja2g0085 456 PANTHER DIMETHYLANILINE MONOOXYGENASE 13 453 - -
Lja2g0085 456 SUPERFAMILY FAD/NAD(P)-binding domain 260 439 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0085 Lja-Chr2 651157 656013 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0085 - - gmx:100793203 747.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0085 2 651157 656013 Lja2g0085 2 651157 656013 ECH