Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0070 ATGAATCGATTAGCATTTCCCAAATCCTTTACGCAACGATGCAGAGCCATACACCAAACAACTTCCAAACACAGTCCACAAACCCAGCTCCATAGTGCTGGACCCGTCGCCTCTCTCCTCAAGTCCCGCTCCGTTATACGATTCCGAGGACCTGACACCATCAAGTTCCTTCAGGGCCTCTTGACCAACGATGTACGGAGGTTTGCTGAACCCGTTGGTGAGAAAACCGCCAATATGCCTACACCCAACGTGCCTGCTGCGTCGGTTCCTCCTTTGTATGCTGCGTTGTTGACCCCTCAAGGGAGGTTCCTCTACGACCTCTTTCTCTATAACCCGCCCAAAGTCACCGCCAAGCTTGATAGAACCGGGTCTGGGCCTGGCTCCGACGCCGCCGATGAACCCTTTGATTTGTATGCCGATGTAGATTCTTCTGTGTTGGATGAGTGTTTGGAAACCTTCATAAAATACCGGTTGAGGTCAAAGGTTGAGATTGATGATGTCACAAACGATTTCTCATGCTGGCAGCGTTATGGTTCTGGCCCTACTGAGAAGTCCTCACACGTAGAAGAACCAGAGGCAGCTTCTGTTGGCTGGGGTGCTGGTGTGGATGATGCTGCAATGTCATCTTCACGTGGGGGTAATCTTGGGTGGCAATGGTTTAAGGATCCCAGATTGGCCTGTCTTGGTTTCAGAGGGATATTCCCATCAAATATAATTCCACCTCTAATTGAGGCTGACAAAGAGACTGATGAAGAGAATTACCTTTTATGGAGAATAGAGAAGGGAGTAGCAGAAGGATCAACTGAGATTCCAAAAGGTGAGGCAGTGCCGCTTGAGTGTAATCTTGTAGGCCTTAATGCAATCAGCTTTGACAAAGGTTGCTATGTGGGCCAGGAACTCGTTGCTCGTACACACCACAGAGGAGTGATTCGGAAGCGTATAGTTCCTCTAAGGTTTCTTGACAGTGATGGGAAAGAATTATTAGACAAAGTCGCTCCAGGCTCAGAAGTAATAAACACAGCATCTAGCAAAAAAGCTGGTACAGTGACTACTGCCCTAGGAGGTTGTGGGTTGGGGCTCTTGCGGCTGGAGGAAGCTTTCAAGGGGTCCAGTGCCTTGTCCATTCAAGGACAAGAGGATGTGAAGGTTGTTGCTAGTAAACCAGATTGGTGGCCTTCTGATTGGCTTCAAGATCATCAACAGCACACTGCTTTTGCCTAG 1221 0.4881 MNRLAFPKSFTQRCRAIHQTTSKHSPQTQLHSAGPVASLLKSRSVIRFRGPDTIKFLQGLLTNDVRRFAEPVGEKTANMPTPNVPAASVPPLYAALLTPQGRFLYDLFLYNPPKVTAKLDRTGSGPGSDAADEPFDLYADVDSSVLDECLETFIKYRLRSKVEIDDVTNDFSCWQRYGSGPTEKSSHVEEPEAASVGWGAGVDDAAMSSSRGGNLGWQWFKDPRLACLGFRGIFPSNIIPPLIEADKETDEENYLLWRIEKGVAEGSTEIPKGEAVPLECNLVGLNAISFDKGCYVGQELVARTHHRGVIRKRIVPLRFLDSDGKELLDKVAPGSEVINTASSKKAGTVTTALGGCGLGLLRLEEAFKGSSALSIQGQEDVKVVASKPDWWPSDWLQDHQQHTAFA* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0070 406 PANTHER UNCHARACTERIZED 24 394 IPR045179 -
Lja2g0070 406 Gene3D Probable tRNA modification gtpase trme; domain 1 14 388 IPR027266 GO:0005515
Lja2g0070 406 SUPERFAMILY Folate-binding domain 36 309 - -
Lja2g0070 406 TIGRFAM ygfZ_signature: folate-binding protein YgfZ 253 318 IPR017703 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0070 Lja-Chr2 531559 534187 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0070 K22073 - gmx:100804156 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0070 2 531559 534187 Lja2g0070 2 531559 534187 ECH