Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0059 ATGCCACCAACATCTAAACTAGAAGAGAACCTTAGCTCAAACCAGAAAATTAGCCAACAACCATCTTCACCTTCTCTGCCTCTGCAAACTCAAACATGTCCTGCAAATTTACTGAACATGGTGATATTAGAGCTGAGAGTTCAACGAGGACTAGCCCTTCCAATGGTGGCCATGAACCTGGCTTGGTTTGCCAAGACCGCCATCACAACAGCCTTTTTGGGTCGATTGGGGGAGCTCAGCTTAGCCGGCGGTGCGCTCGGCTTCACTTTTGCTAATGTCACCGGCTTCTCTGTCTTAAATGGTCTCTGCGGCGCCATGGAACCCATCTGCGGACAGGCTCATGGTGCTAAAAACACCACCCTCCTTCACAAGACCCTTCTCATGACAATCATGTTGTTGCTATTGCTAACACTTCCCATTACTTTCCTGTGGCTCAATGTTGATAAAATCTTGATTCATTTTGGCCAGCAAGAAGAAATTGCAACTGTGGCAAAAACCTTTGTTTTCTCTCTCATACCTGACTTGTTTGTCACCTCACTCTTCTGTCCCTTAAAAGCATACCTCAGCTCTCAAAGCATAACTCTTCCCACCATGTTCAGTTCAGCTGTGGCACTAGTTTTCCACATACCTGTTAACATTCTGCTCTCCAAAACCATGGGTCTGAGGGGAATTTCCATGGCAGTGTGGATAACTGATCTTATTGTCATGGTTTTGCTGGCCATTTATGTTGTGATTCTTGAGCATAGAAAGGGTAGCATGTGGAAGGAAGGAGGGTGGTGGGAACAGAGCATTGCAGATTGGACTAGGCTGCTCAAGCTTTCTGGACCATGCTGCCTCAACACATGCCTGGAGTGGTGGTGCTATGAGATTCTTGTCCTGCTCACTGGCCACTTGGCAAACGCAAAGCAAGCAGTGGGGGTTTTGGCCATTGTGCTCAACTTCGATTATTTGCTTTTCTCAGTGATGCTGTCGCTAGCCACTTGTGTTTCCACCCGGGTCTCAAATGAGCTGGGCGCGAACCAAGCTGGACGCGCTTACCGATCAGCGTGTGTGTCTCTTGCATTGGGGCTTATCTTAGGTTGCATTGGCAGCTTGGTGATGGTGGCTGCCAGGGGAATTTGGGGGCCTCTGTTTAGCCATGACAGAGGGATTATCAATGGAGTGAAGAAGACAATGTTGTTGATGGCTCTGGTGGAAGTGTTCAATTTTCCATTGGCAGTCTGTGGAGGCATAGTTCGTGGGACCGCTCGGCCTTGGTTGGGAATGTATGCTAATCTAGGTGGATTTTACTTCCTGGCACTGCCTCTGGGCGTGGTTTTTGCCTTCAAACTCAATCTCGGGCTTTTTGGACTCTTCATTGGACTCATTACTGGTATTGTCACCTGTTTGTCTCTATTAGTGATATTCATTGCGAGAATAAACTGGGAGGAAGAAGCTTCCAAGGCACAAGCACTAGCCAGCAACGAGCATGTGAAGGAAGTTCCCAAATATGAACTAGAACAACAAATGGAGGCCCGTGAACATGAAGTATAA 1533 0.4755 MPPTSKLEENLSSNQKISQQPSSPSLPLQTQTCPANLLNMVILELRVQRGLALPMVAMNLAWFAKTAITTAFLGRLGELSLAGGALGFTFANVTGFSVLNGLCGAMEPICGQAHGAKNTTLLHKTLLMTIMLLLLLTLPITFLWLNVDKILIHFGQQEEIATVAKTFVFSLIPDLFVTSLFCPLKAYLSSQSITLPTMFSSAVALVFHIPVNILLSKTMGLRGISMAVWITDLIVMVLLAIYVVILEHRKGSMWKEGGWWEQSIADWTRLLKLSGPCCLNTCLEWWCYEILVLLTGHLANAKQAVGVLAIVLNFDYLLFSVMLSLATCVSTRVSNELGANQAGRAYRSACVSLALGLILGCIGSLVMVAARGIWGPLFSHDRGIINGVKKTMLLMALVEVFNFPLAVCGGIVRGTARPWLGMYANLGGFYFLALPLGVVFAFKLNLGLFGLFIGLITGIVTCLSLLVIFIARINWEEEASKAQALASNEHVKEVPKYELEQQMEAREHEV* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0059 510 PANTHER PROTEIN DETOXIFICATION 56 33 491 - -
Lja2g0059 510 PANTHER MULTIDRUG RESISTANCE PROTEIN 33 491 - -
Lja2g0059 510 Coils Coil 500 510 - -
Lja2g0059 510 TIGRFAM matE: MATE efflux family protein 54 451 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lja2g0059 510 Pfam MatE 54 213 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lja2g0059 510 Pfam MatE 276 438 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lja2g0059 510 MobiDBLite consensus disorder prediction 1 28 - -
Lja2g0059 510 CDD MATE_eukaryotic 44 481 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0059 Lja-Chr2 469136 470668 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0059 K03327 - gmx:100804083 778.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0059 2 469136 470668 Lja2g0059 2 469136 470668 ECH