Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0055 ATGGCCACCTCTCACGGTGGTGGTGGTGGTGGTAACGGTTACAGAAATGGTACTCACAGTCAAAGTCATAGAACCTCTTTCAAGCCGGCAAATGTGAAGTCCAAACCTACTCAACGGCGGAGTAGCACCGGCAGCAGCAACAGTAACGGCAAGGACCATGCTGCTGTGCCTGGAAGGGTTAGAGTAGCGGTTAGGTTGCGGCCACGGAATGCCGAGGAATTATTGGCTGATGCTGATTTTGCGGACTGTGTGGAACTACAGCCGGAGCTCAAAAGGTTAAAACTCCGGAAGAACAATTGGGATGCAGATACTTATGAATTTGATGAGGTGCTCACTGAATTTTCGTCACAAAAACGTGTTTATGAAGTTGTGGCCAGGCCTGTTGTGGAGAGTGTGCTGGATGGCTACAATGGGACAGTTATGGCATATGGGCAAACTGGTACTGGTAAAACTTATACTCTTGGACGACTTGGGGAGGAAGATACAGCTGCACGTGGAATAATGGTGCGAGCTATGGAGGATATTTTTGCAGATGTTTCTTTGGAAACTGATTCTGTCTCGGTCTCATATTTGCAGCTTTATATGGAAACTATACAAGATCTGCTTGACCCGGCCAATGATAATATCACCATCGTAGAAGATCCCAAAACTGGTGATGTTTCGCTACCCGGAGCTAGCCTAGTTGAGATTAGGGACCAGCAGAGTTTTCTAGAACTACTAAGATTAGGAGAAGCTCACCGCTTTGCTGCAAATACAAAACTGAATACAGAATCTTCTCGAAGTCATGCTATTCTGATGGTTCATGTCAAGAGATCCGTCAAGGGAAGAGATCCCACTGTTTCAAGTGAAAATGGCAATCATCCGCACATGGTTAAATCATTAAAGCCTCCTGTCATTCGGAAAGCCAAGTTGGTTGTTGTAGATCTTGCTGGTTCAGAGCGAATTGATAAGTCAGGCAGTGAAGGACATACATTAGAAGAAGCCAAATCTATCAATCTGTCCTTGAGTGCGTTGGGGAAGTGTATCAATGCACTTGCGGAGAACAGTGCGCATGTTCCATTTCGTGACTCAAAGCTTACTAGATTGTTACGTGATTCATTTGGAGGCACAGCAAGAACTTCACTGGTCATTACTATTGGACCCTCTCCGCGGCATAGGGGAGAGACTGCCAGTACTATAATGTTTGGACAGAGGGCTATGAAGGTGGAAAACATGGTAAAGCTAAAGGAGGAATTTGATTACAAAAGCTTATCTAGAAGGCTAGAAATAGAATTAGATAAACTCATTATGGAACATGAAAGGCAGCAGAAGGCATTTGAGGATGAGATAAAAAGGTTAGCCACCGAAGCACAACATCAGATATCTGAGACTGAAAAAAACTACATGGATTCATTGGAGAAGGAAAGAGCAAAATATCAGAAAGACTATATGGAATCAATTAAGAAGCTTGAAGAGAAGATGGTGATGAATCTTCGAAAGAATGAGGAACCTCATATGAAGTCAAGTGGAGAGATTCCTGAGGTGTCTGCTGAGGAACTAGCTGATCTGAAAAGAAATCTACAAAAGGAGACTCTTTTAAGAAAAGCTGCTGAAGGGGAGGTGAATAATTTGAAGATTCAAGTTGCTGAGCTAAAAAAGTCAGAGGCATTAGGAAAGTCAGACATCTTAAAACTTCATAGGATGTTGGAAGATGAGGCACATCAGAAAGAGAAACTTGAAGGAGAAATAGCAATATTACAAAGTCAAATGTTGCAGTTTAGTCTTGAAGCCGATGAGACAAGACGACAACTAGACAAGGGTGGATTTGAAAAAGAAGTGGGTTGTCATGATTCTCCTACTTCCCAAGTCAAGCATCAGCAGCAAGCTTCAGGAAATGGAGAGAAGCCCTCTATAGCCAAGCTCTTTGAGCAAGTGGGATTGCAGAAGATTTTGTCATTGCTTGAAGCAGAAGATGCTGATGTGCGAGTCCATGCTGTGAAAGTTGTAGCAAATCTAGCTGCTGAAGAAACAAATCAGGGGAAGATTGTTGAAGCTGGAGGGCTTACATCCTTGCTTACGCTGCTTAAGACCTCACAAGATGAGACCATACATAGAGTTGCTGCAGGTGCAATTGCAAATTTGGCAATGAATGAATCAAACCAAGAACTCATTATGGCCCAAGGGGGAATTAGTTTACTGTCAATGACTGCAGCCAATGCTGAAGATCCTCAAACCCTTAGAATGGTTGCTGGAGCCATTGCTAATCTTTGTGGCAATGATAAGCTGCGAACAAAACTAAGGGGCGAAGGTGGTATCAAGGCACTACTGGGAATGATCAGATGCAGACATCCTGATGTGCATGCACAGGTTGCTCGCGGAATAGCAAATTTTGCGAAGTGTGAGTCGAGAGCATCTAGTCAAGGGACAAAGAGCGGAAGATCTTTCCTTATTGAGGATGGCGCCCTTCCATGGATTGTGCAAAATGCAAATAACGAAGCCTCATCAATTAGGCGTCATACTGAGCTTGCACTCTGTCACTTAGCTCAACATGAAGTAAATGCAAGACACATGATTCGGGAGGGTGCATTATGGGAGCTAGATCGTATCGCACGAGATTGTTCAAGAGAAGACATAAAGACTCTTGCACATCGAACACTAGTCTCCAGCCCCACTTTCCAAGCTGAAATGAGGCGTTTGCGGGTGAATTATTGA 2691 0.4381 MATSHGGGGGGNGYRNGTHSQSHRTSFKPANVKSKPTQRRSSTGSSNSNGKDHAAVPGRVRVAVRLRPRNAEELLADADFADCVELQPELKRLKLRKNNWDADTYEFDEVLTEFSSQKRVYEVVARPVVESVLDGYNGTVMAYGQTGTGKTYTLGRLGEEDTAARGIMVRAMEDIFADVSLETDSVSVSYLQLYMETIQDLLDPANDNITIVEDPKTGDVSLPGASLVEIRDQQSFLELLRLGEAHRFAANTKLNTESSRSHAILMVHVKRSVKGRDPTVSSENGNHPHMVKSLKPPVIRKAKLVVVDLAGSERIDKSGSEGHTLEEAKSINLSLSALGKCINALAENSAHVPFRDSKLTRLLRDSFGGTARTSLVITIGPSPRHRGETASTIMFGQRAMKVENMVKLKEEFDYKSLSRRLEIELDKLIMEHERQQKAFEDEIKRLATEAQHQISETEKNYMDSLEKERAKYQKDYMESIKKLEEKMVMNLRKNEEPHMKSSGEIPEVSAEELADLKRNLQKETLLRKAAEGEVNNLKIQVAELKKSEALGKSDILKLHRMLEDEAHQKEKLEGEIAILQSQMLQFSLEADETRRQLDKGGFEKEVGCHDSPTSQVKHQQQASGNGEKPSIAKLFEQVGLQKILSLLEAEDADVRVHAVKVVANLAAEETNQGKIVEAGGLTSLLTLLKTSQDETIHRVAAGAIANLAMNESNQELIMAQGGISLLSMTAANAEDPQTLRMVAGAIANLCGNDKLRTKLRGEGGIKALLGMIRCRHPDVHAQVARGIANFAKCESRASSQGTKSGRSFLIEDGALPWIVQNANNEASSIRRHTELALCHLAQHEVNARHMIREGALWELDRIARDCSREDIKTLAHRTLVSSPTFQAEMRRLRVNY* 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0055 896 CDD KISc 59 400 - -
Lja2g0055 896 SMART kinesin_4 57 410 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja2g0055 896 Gene3D Kinesin motor domain 50 433 IPR036961 -
Lja2g0055 896 Coils Coil 418 482 - -
Lja2g0055 896 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 679 722 IPR000225 GO:0005515
Lja2g0055 896 MobiDBLite consensus disorder prediction 612 626 - -
Lja2g0055 896 PRINTS Kinesin heavy chain signature 303 321 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja2g0055 896 PRINTS Kinesin heavy chain signature 352 373 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja2g0055 896 PRINTS Kinesin heavy chain signature 135 156 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja2g0055 896 MobiDBLite consensus disorder prediction 603 626 - -
Lja2g0055 896 Coils Coil 555 589 - -
Lja2g0055 896 PANTHER KINESIN-LIKE PROTEIN KIN-UA 42 888 IPR033291 GO:0008017|GO:0032886|GO:0048364
Lja2g0055 896 ProSitePatterns Kinesin motor domain signature. 302 313 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lja2g0055 896 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 638 680 IPR000225 GO:0005515
Lja2g0055 896 SUPERFAMILY ARM repeat 627 879 IPR016024 -
Lja2g0055 896 ProSiteProfiles Kinesin motor domain profile. 59 402 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja2g0055 896 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 437 IPR027417 -
Lja2g0055 896 MobiDBLite consensus disorder prediction 14 52 - -
Lja2g0055 896 Pfam Armadillo/beta-catenin-like repeat 675 708 IPR000225 GO:0005515
Lja2g0055 896 Gene3D - 730 891 IPR011989 -
Lja2g0055 896 Gene3D - 622 729 IPR011989 -
Lja2g0055 896 PANTHER KINESIN-RELATED 42 888 IPR027640 GO:0003777|GO:0007018
Lja2g0055 896 MobiDBLite consensus disorder prediction 1 59 - -
Lja2g0055 896 Coils Coil 513 547 - -
Lja2g0055 896 SMART arm_5 752 792 IPR000225 GO:0005515
Lja2g0055 896 SMART arm_5 710 751 IPR000225 GO:0005515
Lja2g0055 896 SMART arm_5 628 667 IPR000225 GO:0005515
Lja2g0055 896 SMART arm_5 668 709 IPR000225 GO:0005515
Lja2g0055 896 Pfam Kinesin motor domain 65 402 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0055 Lja-Chr2 429782 438956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0055 9 428 Miscellaneous Gene Families AT2G21380 32.118 1.36e-46 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0055 - - gmx:100804612 1516.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0055 2 429782 438956 Lja2g0055 2 429782 438956 ECH