Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0048 ATGACGTATTTGGAGGGGAATGACGGTGGTCGCTCAAGGGAGGGCGATGGTGACTACGTTAAATTACGGTGGGGAACTCAAGATTCTCAATCGGAGGTCGCACTTCCTTCTCCGCCACCGCGAGGTGCTGCGAAGCTATGGTTTTGGGTTAAATTGGTGGCGTCTTTCCTATGTCTAGGGCTATTGGCTTTCATTGTTTTCCAATGGGTTGGACCCTTTTTTATAGAAAAGGTGATTATTCCAATAACAAATTGGGAGAGGAACAGATTCAGTCCTTCGGAGTTAGCGGTTATGTTGTTTGGTTCTATAGCACTATTTCCTACCTTGCTTTTGCCCTCTTCACCTTCCATGTGGATGGCTGGAATGCTATTTGGTTATGTTTTAGGATTCATGCTAATAATTTCTGCAGCTGCTGTGGGAGTATCCCTCCCCTTTTTCATTGGTTCAATCTTCCATCGCAAAATCGAAGGGTGGTTAGAAAAGTATCCAAAGAAAGCTTCTGTTTTAAGATTTGCCGGTGAAGGAAATTGGTTTCATCAGTTTCAAGCAATTACTTTAATAAGGATTTCTCCATTCCCGTATATTCTCTTCAACTATTGTGCCGTCGCAACAACTGTTAAGTATGGCCCTTACTTGTGCGGATCCTTGGTAGGAATGGTGCCAGAAGTACTTGTTTCACTCTATACGGGAATTTTGATCCGAACGTTGGCCAATGCTTCACATAAAGAGCACACTATATCTGTCGTGCAAATTGTCCTCAATGTTGTTGGCTTGTGCATAACTGTAGCTACGGTATATTTTATCACAGTCTATGCTAAGAGGCGGCTCAAAGAGTTACAGAAAGGGGGTGAGCTGCTATTGCAATAA 867 0.4325 MTYLEGNDGGRSREGDGDYVKLRWGTQDSQSEVALPSPPPRGAAKLWFWVKLVASFLCLGLLAFIVFQWVGPFFIEKVIIPITNWERNRFSPSELAVMLFGSIALFPTLLLPSSPSMWMAGMLFGYVLGFMLIISAAAVGVSLPFFIGSIFHRKIEGWLEKYPKKASVLRFAGEGNWFHQFQAITLIRISPFPYILFNYCAVATTVKYGPYLCGSLVGMVPEVLVSLYTGILIRTLANASHKEHTISVVQIVLNVVGLCITVATVYFITVYAKRRLKELQKGGELLLQ* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0048 288 Pfam SNARE associated Golgi protein 111 231 IPR032816 -
Lja2g0048 288 PANTHER EXPRESSED PROTEIN 11 287 - -
Lja2g0048 288 PANTHER SNARE ASSOCIATED GOLGI FAMILY PROTEIN-RELATED 11 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0048 Lja-Chr2 383213 386065 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0048 - - gmx:100782521 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0048 2 383213 386065 Lja2g0048 2 383213 386065 ECH