Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0040 ATGTCTTCAGACAATGTGAAGGAAAATGCATCAGTAGTTGATTTGTCAGGGGTTGAATGGAGTCATGACACTGGAAATTCAGATGAGCCAGAGAGCTCAAGTTGCAAGTTTAATGAAGACACTAATACAACTAGGGCAGATAAAGTGAGACGTTCTCATTCTCAGAAAGGGAATCCAACTGGAACTGGAGTGGGAAAATTGCAGAATAAAAAATATTTTATCATTAAGAGTTTGAGCCATCAAAATATCCGTTTGTCAATGGAGAAAGGAATTTGGGCCACTCAAATCATGAATGAGCCAATACTGGATGAAGCTTTTCATAATTCAGATTGTGTAATCCTTATATTCAGTGTCAACATGAGTGGTGCTTTCCAAGGGTACGCAAAAATGGTGTCCTCCATTGGGCGGAGGAGAGACAATGTTTGGCGTGAGGGAAGCGGTAAAAGTAATCCTTGGGGTCGCAATTTTAAGGTCAAATGGCTGTGTTTGAATGACTTGCCTTTCCATGAGACTCTTCATCTCAAGAATCCATTGAATGATTATAAACCTGTTAAAATTAGCAGAGATTGCCAGGAGTTATCTCCAGATATTGGTCTAGCCCTTTGTGAACTCCTTGATGCTAAGAATAATGCAGATGGCCTGCTGACCGGTTCATCAAGGTATAATTTTTCTTCGAAGGGTCATGCGAAGACTCCAAGTTCAATGGGATATAATGATTGTAACTTGCCCTCACTGCATTTGCCATGGTCAATGCCCTTGCCTTATTCTTCATCGTTTTACCAAAATCAAGATTCATCAAACCAGAGATTTGATGAAACAATGTACACTGGAGTATTGCCTATCACTTCTGAGTCATCGAAAGTGGCAGGGATTAAACGTTCTCATTTTGATGGTCAAATTTCAAAGCCAGTAGTGGACAAGGATGTGGGTTCTGGATTTTGTGCTTGGGATTTGTCTTCAAAAAGCCCTTTAGCCAGTATCCTAACCGAGGATGATTTTCTTAACATGTCCTATGAAGAATACTTGGAGGTCTATAGCAGATTCAGGAAACAGTTTCGCGTCAGTGTCAGTGAAACTAAACCATCTAGGAAACAACAGGAAAGGTTGAGACGTAATTCGTATGGTGATGATGATAGGAATTTAGGGGAGGTTGATAGCAAAAGGAGCAACTCTAATGGGAGGATGCATCCGCCATCTTTGCCTAGGATATAA 1212 0.4059 MSSDNVKENASVVDLSGVEWSHDTGNSDEPESSSCKFNEDTNTTRADKVRRSHSQKGNPTGTGVGKLQNKKYFIIKSLSHQNIRLSMEKGIWATQIMNEPILDEAFHNSDCVILIFSVNMSGAFQGYAKMVSSIGRRRDNVWREGSGKSNPWGRNFKVKWLCLNDLPFHETLHLKNPLNDYKPVKISRDCQELSPDIGLALCELLDAKNNADGLLTGSSRYNFSSKGHAKTPSSMGYNDCNLPSLHLPWSMPLPYSSSFYQNQDSSNQRFDETMYTGVLPITSESSKVAGIKRSHFDGQISKPVVDKDVGSGFCAWDLSSKSPLASILTEDDFLNMSYEEYLEVYSRFRKQFRVSVSETKPSRKQQERLRRNSYGDDDRNLGEVDSKRSNSNGRMHPPSLPRI* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0040 403 Gene3D ph1033 like domains 31 212 - -
Lja2g0040 403 PANTHER YTH DOMAIN-CONTAINING PROTEIN 1 12 330 - -
Lja2g0040 403 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 12 330 IPR045168 -
Lja2g0040 403 ProSiteProfiles YTH domain profile. 70 205 IPR007275 GO:0003723
Lja2g0040 403 MobiDBLite consensus disorder prediction 356 385 - -
Lja2g0040 403 MobiDBLite consensus disorder prediction 1 64 - -
Lja2g0040 403 Pfam YT521-B-like domain 70 205 IPR007275 GO:0003723
Lja2g0040 403 MobiDBLite consensus disorder prediction 20 40 - -
Lja2g0040 403 MobiDBLite consensus disorder prediction 356 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0040 Lja-Chr2 338648 343703 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0040 K20100 - gmx:100784130 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0040 2 338648 343703 Lja2g0040 2 338648 343703 ECH