Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0039 ATGGCGCCTACTGTTGTTGAGAGAGTTGAAAGCTTATCGGGCAGTGGGATACAATCTATCCCAAAGGAATATGTGAGGCCAAAAGAAGAGCTGGCAAACATAGGCGACGTTTTTGAGGAGGAAAAGAAAGTTGGGCCTCAAGTTCCGACGATTGACTTGAAAGATATAGACTCGCCGGACGAGTTTGTTCGGGCCAAGTGCAGGGAGAAGCTTAGGAAGGCAGCCGAGGAGTGGGGGGTGATGCACTTGGTGAATCATGGGATCCCGGACGAGCTCCTAAACCAATTGAAGAGTGCTGGGGCAGAGTTTTTCTCTTTGCCGGTCGAGGAGAAGGAGAAGTATGCAAATGACCAGGCGGCCGGGAATGTGCAAGGGTACGGGAGCAAGCTGGCCAACAATGCCAGTGGTCAGCTTGAATGGGAAGATTACTTCTTCCACCTTATCTTTCCAGAAGACAAGCGTGACCTCTCCATCTGGCCCAAGACACCATCATATTATACGGAAGTTACCAGCGACTATGCAAGGCGACTAAGAGTGCTTGCGAGCAAGATACTGGAAGTGCTATCTCTGGAATTGGGTCTCGAAGAAGGAAGGTTAGAGAAGGAAGTTGGTGGAATGGAAGAGCTTCTACTTCAGATGAAAATCAACTACTACCCAAAATGCCCCCAGCCAGAGCTAGCTCTTGGAGTTGAAGCCCACACCGACATAAGTGCACTCACTTTCCTCCTCCACAACATGGTCCCAGGCCTGCAGCTTTTCTACGAAGGAAAATGGGTCACGGCAAAATGCGTTCCTGATTCAATCCTCATGCACATTGGTGACACCACTGAGATTTTAAGCAATGGTAAGTTCAAGAGCATTCTTCACAGGGGTTTGGTGAACAAGGAAAAAGTTAGAATATCTTGGGCAGTGTTCTGTGAACCCCCTAAGGAGAAAATCATCCTCAAGCCACTGCCTGAGCTTGTGACTGAGACCGAACCAGCGCGGTTTCCGCCACGCACTTTTGCTCAGCATATTCATCACAAACTGTTCAGGAAGGACCAGGAAGCTTCAGCCCAATCCAAATGA 1068 0.4916 MAPTVVERVESLSGSGIQSIPKEYVRPKEELANIGDVFEEEKKVGPQVPTIDLKDIDSPDEFVRAKCREKLRKAAEEWGVMHLVNHGIPDELLNQLKSAGAEFFSLPVEEKEKYANDQAAGNVQGYGSKLANNASGQLEWEDYFFHLIFPEDKRDLSIWPKTPSYYTEVTSDYARRLRVLASKILEVLSLELGLEEGRLEKEVGGMEELLLQMKINYYPKCPQPELALGVEAHTDISALTFLLHNMVPGLQLFYEGKWVTAKCVPDSILMHIGDTTEILSNGKFKSILHRGLVNKEKVRISWAVFCEPPKEKIILKPLPELVTETEPARFPPRTFAQHIHHKLFRKDQEASAQSK* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0039 355 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 351 - -
Lja2g0039 355 SUPERFAMILY Clavaminate synthase-like 6 345 - -
Lja2g0039 355 Gene3D - 4 351 IPR027443 -
Lja2g0039 355 Pfam non-haem dioxygenase in morphine synthesis N-terminal 48 161 IPR026992 -
Lja2g0039 355 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 209 308 IPR005123 -
Lja2g0039 355 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 351 - -
Lja2g0039 355 Pfam 2OG-Fe(II) oxygenase superfamily 212 308 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0039 Lja-Chr2 332895 336107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0039 7 338 Glycosyltransferase AT5G59530 30.029 7.77e-41 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0039 K05277 - tcc:18606417 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0039 2 332895 336107 Lja2g0039 2 332895 336107 ECH