Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0034 ATGGGTACTCTAACTACTGCTCCTGTTCTCACTTCTAAGTTCAAGCCTTCTTCTCTTTCTCCCCAGGAAAAATTGTCTTTTTTCCCTCATAGAAGAAGGTTTGGGAAGAAGAACCAAGCAATTGTGCCAGTGGCTAGGTTGTTTGGGCCAGCTATATTTGAAGCTTCAAAGCTGAAGGTTTTGTTCTTAGGAGTGGATGAAAATAAACACCCTGGAAATCTTCCAAGGACTTATACACTAACACACAGTGATATAACCTCCAAACTCACTTTGGCTATCTCTCAAACCATAAATAATTCTCAGTTGCAGGGATGGTACAATAAGCTGCAAAGGGATGAAGTGGTGGCACAGTGGAAGAAAATGAAGGGAAAGATGTCACTTCATGTTCACTGCCACATAAGTGGAGGCCACTTCCTATTGGATATATTTGCTAGGCTAAGATACTTCATCTTCTGCAAGGAGCTACCAGTGGTGTTGAAGGCCTTTGTTCATGGAGATGGGAATCTATTGAACAACTACCCAGAATTGCAGGATGCATTGGTTTGGGTATACTTTCACTCAAAGATTCCAGAGTTCAACAAGGTACAGTGTTGGGGACCACTGAAGGAGGCGGCTGCACCGTCAGGTGGGTCCCCGGAGAAAGAAGGTGAAGGGGTGAAGATGCCGGATCCGTGTCAAGAAGAATGTGAGTGTTGCTTTCCTCCTCCACAGGCATTGAATCCAATCCAATGGTCTGAAGAAGTTCCCTCTCCCAATTATGAAGCTTTTGATGGGGTTGGGACCCAACAAAACTTGTAG 798 0.4449 MGTLTTAPVLTSKFKPSSLSPQEKLSFFPHRRRFGKKNQAIVPVARLFGPAIFEASKLKVLFLGVDENKHPGNLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNKLQRDEVVAQWKKMKGKMSLHVHCHISGGHFLLDIFARLRYFIFCKELPVVLKAFVHGDGNLLNNYPELQDALVWVYFHSKIPEFNKVQCWGPLKEAAAPSGGSPEKEGEGVKMPDPCQEECECCFPPPQALNPIQWSEEVPSPNYEAFDGVGTQQNL* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0034 265 Pfam Staygreen protein 53 204 IPR024438 -
Lja2g0034 265 PANTHER PROTEIN STAY-GREEN 1, CHLOROPLASTIC-RELATED 2 252 - -
Lja2g0034 265 PANTHER PROTEIN STAY-GREEN 1, CHLOROPLASTIC 2 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0034 Lja-Chr2 307636 309932 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0034 K22013 - gmx:732541 416.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0034 2 307636 309932 Lja2g0034 2 307636 309932 ECH