Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0022 ATGATGAGAGGTTCGAAGCGTATGGCCGTGTCGGAACCCAACCACTCCGATACCACGGAAACCGCCGCCTTCCGGAATAAAAGAGTAATGGAAGGATCTCTGTTTGATGCCCATAGGGCTGAACCGTCCCAACAACCAACGGTTTCAACACCGCCTTTGGATATGAAACGGGCAGAGTCATCACAGCAGCATGTGAGAGCTTTAAATACCCAGTTTGCAAGCTGGATTCAAACACAACTAAAGAATCATCCTGATGAGCTCTGGGAAGATGGTGTAAGAGATTACCTCGATCATGCTTCAAGCATTATGGAGAAATTTAGTGATGTGGTCAGCTGGCTCAAAGCAAATGCAACCAAGGCAGAAATTTTGGCTCCTGATGGTGGTACTTCTTTTGCTGGGAAAAAGTTCTTTCCTGAAGCAACAAACAAAGAAAATAAAACTTTTGGAGAAAAAACTGGGTCTACTCCTTTTAGTACCGCAACAACTTTTGCTGGGCAAAAGTACTTGCCTGAGGTATCAAACAAAGAAAATAAAATTTTTGGAGAAAATACTGGATTTACTCCTGTTAGTACAGCTACAACTTTTGCTGGGAAGAGCTTCTCGCCTGAGGTATCAAACAAAGAAAATAAAGCTTTTGGAGAAAAAACTGGATTTAGTCCTGTTAGTACAGCTACAACTTTTGCTGGGAAGATCTTCTCACCTGAGGTATCAAACAAAGAAAATAAAGCTTTTGGAGAAAAAACTGGATTTAGTCCTGTTAGTACAGCTACAACTTTTGCTGGGAAGAGCTTCTCGCCTGAGGTATCAAACAAAGAAAATAAATCTTTTGGTGAAAAAACTGGGTCTCCTCCTGTTAGTACAACTACAACTTTTGCTAGTTCTTGGACCCCTGGATTATTTTCAAACAGTCAAAACGTTTTTGCATTTGGAAATCAAAGTTCAGCTCCATCTAACCATGGCGCTTCAGATGATGTAGATGGTGATAATGACGAGGAGCAGCCTAGCAGCCCATCAGTGAAGAAGTCTGAAGAGAAAGGTGTAGTAGTTGTACATGAAGCGAAGTGCAAGCTTTATGTGAAGTCAAGTGATCCAGCAGATAATGATGCCTGGAAAGATAAAGGAATGGGCCAACTGTCTATTAAATGCAAAGAGGGTGTGAGCAAGGCTACCCGAGAGTCCAAACCTACAATTGTTGTTCGAAATGAGGTAGGGAAAATTCTTCTCAATGCCTTGTTGTATCCAGGAATCAAGACAAATCTACAGAAGAACTCCGTTGTTGCCATATTTCATACTTCGGGTAATCCTGATGGAAGTGGTGGAGATAATGATAGTGTTGTTGCACGAACATTTTTGATCCGGATGAAAACAGAAGATGATCGAAACAAACTGGCTTCAACTATTCAAGAATATGCTCCAACATCTTGA 1425 0.414 MMRGSKRMAVSEPNHSDTTETAAFRNKRVMEGSLFDAHRAEPSQQPTVSTPPLDMKRAESSQQHVRALNTQFASWIQTQLKNHPDELWEDGVRDYLDHASSIMEKFSDVVSWLKANATKAEILAPDGGTSFAGKKFFPEATNKENKTFGEKTGSTPFSTATTFAGQKYLPEVSNKENKIFGENTGFTPVSTATTFAGKSFSPEVSNKENKAFGEKTGFSPVSTATTFAGKIFSPEVSNKENKAFGEKTGFSPVSTATTFAGKSFSPEVSNKENKSFGEKTGSPPVSTTTTFASSWTPGLFSNSQNVFAFGNQSSAPSNHGASDDVDGDNDEEQPSSPSVKKSEEKGVVVVHEAKCKLYVKSSDPADNDAWKDKGMGQLSIKCKEGVSKATRESKPTIVVRNEVGKILLNALLYPGIKTNLQKNSVVAIFHTSGNPDGSGGDNDSVVARTFLIRMKTEDDRNKLASTIQEYAPTS* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0022 474 MobiDBLite consensus disorder prediction 310 345 - -
Lja2g0022 474 MobiDBLite consensus disorder prediction 263 289 - -
Lja2g0022 474 MobiDBLite consensus disorder prediction 1 57 - -
Lja2g0022 474 CDD RanBD_NUP50 343 471 - -
Lja2g0022 474 SMART ranbd_3 331 470 IPR000156 GO:0046907
Lja2g0022 474 MobiDBLite consensus disorder prediction 40 57 - -
Lja2g0022 474 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP50 6 473 - -
Lja2g0022 474 Gene3D - 316 473 IPR011993 -
Lja2g0022 474 SUPERFAMILY PH domain-like 341 471 - -
Lja2g0022 474 ProSiteProfiles Ran binding domain type 1 profile. 341 474 IPR000156 GO:0046907
Lja2g0022 474 Pfam RanBP1 domain 339 469 IPR000156 GO:0046907
Lja2g0022 474 PANTHER RAN BINDING PROTEIN 6 473 IPR045255 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0022 K14295 - jre:109011569 464.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0022 2 191356 195850 Lja2g0022 2 191356 195850 ECH