Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5987 ATGGGTGTCTCCTTCCTCTCATCTTTCTCTTCTCTGCTTCCACTTGTTGCTCACAATTCACTTCCCACCACCAGATACCAACCTCGTTCAGTGCCCATTTGTTGTAGTAAAATTACAGCCGATGTTAGTGATGGAGACCAGTTCCATTCGAAACGGAGAGACATTCTTAAATGCTTCGGGGCCACTATTGGTTTGGAATTGATAGGAAGCTCTGGATCCCTTGTTGGGATGGCTAATGCTGCTGACTTGATAGAACGCGGGCAGCGTTCTGAGTTTCAATCTAAAATTAAGACCACACTTTATACAGCGATCAAGGGAAATCCTGATCTTGTTCCATCCTTACTAAAACTGGCTATAAATGATGCTTTGACTTATGATAAGGCAACAAAAACAGGTGGCCCAAATGGCTCTATAAGGTTCAGCTCAGAAATAAGTAGACCTGAAAATGAGGGGCTCTCTGCTGCCTTGAATTTATTAGAGGAAGCAAAGAAGGAGATAGATTCCTATTCCAAAGGTGGACCGATTTCCTATGCAGATCTCATCCAGTATGCAGCACAAAGTGCTGTCAAGGCTACATTTTTAGCTTCTGCCATTCGCAAATGTGGTGGAAATGTGGAGAAAGGGAATTTACTGTACACTGCATATGGATCAAATGGACAGTGGGCTTTGTTCGACAGGCAATTTGGTAGGGCTGATGCTCAAGACTCAGATCCAGAGGGGAGAGTTCCAATTTGGGAGAAAGCAAGTGTTCAGGAGATGAAAGATAAATTTTCTTCTGTAGGCTTGGGTCCTCGCCAGTTGGCTGTGTTGTCTGCATTCTTAGGTCCTGATCAGACTGCAACTGAGACCTTATTGGCTTCTGATCCGGATGTTGCTCCATGGGTTCAAAAATACCAGCGAAGCCGTGAAACCGTTTCTCAAACAGATTATGAGGTTGATCTGATAGCCGCTTTCACAAAATTGAGTACCTTGGGCCAACAAATCAACTATGAAGCATATACATATCCTCGTAAAAAGATCGACATTACCAAACTCAAATTGTAA 1044 0.4339 MGVSFLSSFSSLLPLVAHNSLPTTRYQPRSVPICCSKITADVSDGDQFHSKRRDILKCFGATIGLELIGSSGSLVGMANAADLIERGQRSEFQSKIKTTLYTAIKGNPDLVPSLLKLAINDALTYDKATKTGGPNGSIRFSSEISRPENEGLSAALNLLEEAKKEIDSYSKGGPISYADLIQYAAQSAVKATFLASAIRKCGGNVEKGNLLYTAYGSNGQWALFDRQFGRADAQDSDPEGRVPIWEKASVQEMKDKFSSVGLGPRQLAVLSAFLGPDQTATETLLASDPDVAPWVQKYQRSRETVSQTDYEVDLIAAFTKLSTLGQQINYEAYTYPRKKIDITKLKL* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5987 347 CDD plant_peroxidase_like 94 344 - -
Lja1g5987 347 Coils Coil 152 172 - -
Lja1g5987 347 Pfam Peroxidase 98 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g5987 347 ProSiteProfiles Plant heme peroxidase family profile. 96 275 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g5987 347 Gene3D - 265 347 - -
Lja1g5987 347 Gene3D - 80 261 - -
Lja1g5987 347 SUPERFAMILY Heme-dependent peroxidases 78 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja1g5987 347 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 74 346 IPR044831 GO:0004601|GO:0034599
Lja1g5987 347 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC 74 346 - -
Lja1g5987 347 PRINTS Plant ascorbate peroxidase signature 129 139 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lja1g5987 347 PRINTS Plant ascorbate peroxidase signature 111 126 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lja1g5987 347 PRINTS Plant ascorbate peroxidase signature 143 167 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lja1g5987 347 PRINTS Plant ascorbate peroxidase signature 271 296 IPR002207 GO:0004601|GO:0006979|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5987 K00434 - gmx:100795192 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5987 1 110326924 110331766 Lja1g5987 1 110326924 110331766 ECH