Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5983 ATGGGAAGGAGCAAAATACAAGTGCTTTATGATGCTTGCCATGCCTTGTTCTCTCAAGGGAAGCTTCCAACTTTTCAACAAATCCACTACCTGAAAAATCTACTAGACAATTTTGAAGCAATAGATGTAGGAATCGACGAGTTCGGGTTTTGTGAGTCTCCTACATCAGATTCAAGCAGGGGATTGCTTTGTGAGCATGGTTTCTCTGAAATAACATACATTCACATTCATGAATGTGACGATTTCTCTATAGGAGTGTTCTGTCTCCCAGCTGGAAAAGTGTTTCCACTTCACGATCACCCGGAAATGACAGTGTTGAGCAAGATCTTATATGGCTCTGTCTATGTCAAAGCTTATGATTGGATCAAATTGGATAGTACTAAGTGCCCAACAATAGGATTGGCCGGGAAGGTAATAGATCAAGTAATGAAAGCACCACATGAGCCAACAGTGTTATTTCCAAGAAGTGGTGGAAACATTCACTCTTTCAGAGCTTTGACACCATGTGCAATACTAGACGTGCTATCTCCACCATACTCTGAAGAGTTTGCAAGGCCTTCAACTTATTACTCAGATGTCCCTATCCCTTCACTTAATGGTTATGCCATTCTAGAGGAGAAACCGTTGCCTAGTGACCTAGTTGTTCATGGAGCGCAATACCTTGGACCTTCGATTGAAACCATGGACGATTACAACTTTGGTCAAATCGGTTATGGAAACTTTGCAAATTGA 732 0.4153 MGRSKIQVLYDACHALFSQGKLPTFQQIHYLKNLLDNFEAIDVGIDEFGFCESPTSDSSRGLLCEHGFSEITYIHIHECDDFSIGVFCLPAGKVFPLHDHPEMTVLSKILYGSVYVKAYDWIKLDSTKCPTIGLAGKVIDQVMKAPHEPTVLFPRSGGNIHSFRALTPCAILDVLSPPYSEEFARPSTYYSDVPIPSLNGYAILEEKPLPSDLVVHGAQYLGPSIETMDDYNFGQIGYGNFAN* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5983 243 PANTHER OS09G0471000 PROTEIN 3 229 - -
Lja1g5983 243 CDD cupin_ADO 80 180 - -
Lja1g5983 243 PANTHER UNCHARACTERIZED 3 229 IPR012864 GO:0016702
Lja1g5983 243 Pfam PCO_ADO 35 225 IPR012864 GO:0016702
Lja1g5983 243 Gene3D Jelly Rolls 51 194 IPR014710 -
Lja1g5983 243 SUPERFAMILY RmlC-like cupins 4 191 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5983 Lja-Chr1 110277120 110278437 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5983 K23953 - gmx:100800920 395.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5983 1 110277120 110278437 Lja1g5983 1 110277120 110278437 ECH