Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5980 ATGGCTCCTTTAACTCACTCTTTTTTCCTCCTCCTCATCCTCTTACTATCTTGCAAACCAAACACTTCACAAGCCAAATTTCGTTCCCCAAACCGCAAACTAGCTTTGGTACAAGAACAACCACTTGTTCTCAAATACCACAAAGGCCCACTCTTAAACGGAAACATCACCCTCCACCTCATATGGTACGGTACATTCACCCCAAAACAACGCTCCATACTCCTCGACTTCATCCAATCACTCTCCGCCACGCGTCACACACCCTCACCCTCCGTTTCATCCTGGTGGAAAACCACGGAACGCTACAGGGGAGGCCCACGCACGCTCACCGTAGCAGATCAAACCCTCCACCGGAGCTACTCCCTCGGAAAATCGCTCAAAATGAACCACCTGCTCAAACTCGCATCGAAGGCTAAATCTCACGCGCCATCCGCGCGTGGTGGTCACGCGATTCATGTTATCCTCACCTCAGCTGACGTGGCGGTTGAAGATTTCTGCATGAACCAGTGTGGGACCCATGATTCGGGCGGTGCGGGTCGAAAACGGGTCGCATACGCTTGGGTTGGTAACCCGGTTACGCAGTGTCCGGGTCAATGCGCGTGGCCGTTTCATAAACCGATTTACGGACCCCAATCGCCGCCGTTGGTTTCGCCGAACGGCGACATTGGCGTCGATGGGATGGTGATAAACCTGGCAACGGTTCTGGCGGGGACAGTTACGAATCCGTTTGACAATGGTTATTTTCAGGGGCCGGCGACTGCGCCGCTGGAGGCGGTGTCGGCGTGCACCGGGATTTTCGGGAAAGGGGCGTATCCGGGTTACCCAGGTAACGTTCTGGTGGATAAGGCGACGGGTGCTAGCTACAATGCGGTGGGTGTGCATGGCCGGAAATTCTTGTTGCCGGCGATGTGGGACCCTGTCAGCTCCACCTGCAAGAGCCTCGTGTGA 948 0.5506 MAPLTHSFFLLLILLLSCKPNTSQAKFRSPNRKLALVQEQPLVLKYHKGPLLNGNITLHLIWYGTFTPKQRSILLDFIQSLSATRHTPSPSVSSWWKTTERYRGGPRTLTVADQTLHRSYSLGKSLKMNHLLKLASKAKSHAPSARGGHAIHVILTSADVAVEDFCMNQCGTHDSGGAGRKRVAYAWVGNPVTQCPGQCAWPFHKPIYGPQSPPLVSPNGDIGVDGMVINLATVLAGTVTNPFDNGYFQGPATAPLEAVSACTGIFGKGAYPGYPGNVLVDKATGASYNAVGVHGRKFLLPAMWDPVSSTCKSLV* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5980 315 PANTHER PROTEIN EXORDIUM-LIKE 2 6 315 - -
Lja1g5980 315 Pfam Phosphate-induced protein 1 conserved region 44 313 IPR006766 -
Lja1g5980 315 PANTHER PROTEIN EXORDIUM-LIKE 5 6 315 IPR006766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5980 Lja-Chr1 110034300 110035349 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5980 - - gmx:100800380 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5980 1 110034300 110035349 Lja1g5980 1 110034300 110035349 ECH