Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5979 ATGGCCTCTCCTGTACACTTTTCAAGTGTTCTATTCACCATTTTTCTCACAATTTCCCTCCTCCATTTGACCTCAGCCAGGATACTCACTGAATCCGAAACCCAACTACTGAAATTCCAATACCACAAAGGCCCTCTCCTCACCGGCAAAATCTCAGTGAACCTCATCTGGTACGGCAAATTCAACCCATCCCAACGCGCCATCATTGCAGATTTCATCACCTCCCTCTCCTCATCCCCCAAATCCACAACATCACAACCCTCTGTCGCCACATGGTGGAAAACCACCGAGAAATACTACCACAACAAATCACCCAAGCTCTCACTCTCTCTAGGAACCCAGATCCTTGAAGAGAAATACTCTCTTGGAAAATCACTCACCACCAACCAAATCATCAAACTCGCATCAAAAGGTCCCCAGAGAAACGCCATCAACGTGGTTCTCACCTCCGCTGATGTGGTAGTGGAAGGTTTATGCTCCAGCAGGTGCGGGACCCATGGTTCCTCTTCTGGCGCACGCATGAACGGAAAGAGATCATCCAAGTTTGCATACATTTGGGTTGGTAACTCTGAGACTCAGTGCTCTGGTCAATGCGCGTGGCCGTTCCACCAACCCATTTACGGTCCACAGAACAAGCCTCTTGTTGCGCCCAACAACGATGTCGCTTTGGATGGAATGGTGATCAATGTGGCGAGTCTGTTAGCTGGGACCGCCACGAATCCTTTCGGGAATGGCTACTTTCAGGGACCTAAAGAGGCGCCTTTGGAGGCTGCGTCGGCTTGCACCGGCGTGTATGGGAAAGGAGCTTACCCTGGCTACGCCGGGAACCTCTTGGTGGACCCCACAACTGGTGCTAGTTACAATGCTAACGGCGTTAGTGGAAGGAAATATCTGCTACCCGCGCTCGTTGACCCTAAAACCTCAGCCTGTTCCACGTTGGTCTAG 945 0.5101 MASPVHFSSVLFTIFLTISLLHLTSARILTESETQLLKFQYHKGPLLTGKISVNLIWYGKFNPSQRAIIADFITSLSSSPKSTTSQPSVATWWKTTEKYYHNKSPKLSLSLGTQILEEKYSLGKSLTTNQIIKLASKGPQRNAINVVLTSADVVVEGLCSSRCGTHGSSSGARMNGKRSSKFAYIWVGNSETQCSGQCAWPFHQPIYGPQNKPLVAPNNDVALDGMVINVASLLAGTATNPFGNGYFQGPKEAPLEAASACTGVYGKGAYPGYAGNLLVDPTTGASYNANGVSGRKYLLPALVDPKTSACSTLV* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5979 314 PANTHER PROTEIN EXORDIUM-LIKE 5 8 314 IPR006766 -
Lja1g5979 314 Pfam Phosphate-induced protein 1 conserved region 40 313 IPR006766 -
Lja1g5979 314 PANTHER PHOSPHATE-RESPONSIVE 1 FAMILY PROTEIN 8 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5979 Lja-Chr1 109915112 109919329 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5979 - - gmx:100799846 516.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5979 1 109915112 109919329 Lja1g5979 1 109915112 109919329 ECH