Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5978 ATGGCCTCCAATGTTCTTATCTTCACTCTTTTCCTCACTTTCTCCTTACTTCAATTGAGCTCAGCCAGGAGACTCACTGAATCAGAAACCCAACTACTAAAATTCCAACACCACAAAGGCCCTCTCCTCACAGGCCAAATCTCAGTGAACCTCATCTGGTACGGAAAATTCAAACCATCCCAGCGTGCCATCATTGCAGATTTCATCACCTCCCTCTCCTCTTCCCCCAAATCCACAACATCACAACCCTCTGTTGACACGTGGTGGAAAACCACCGAGAAATACTACCACAACAAATCACCCAAGCTCGCACTCTCTCTAGGCACCCAAATCCTCGACGAGAAATACTCTCTGGGCAAATCACTCACCACAAACCAAATCATCAAGCTCGCATCAAAAGGTCCCCAGAGTAACGCCATCAATGTGGTTCTTACATCCGCTAATGTGGTAGTGGAAGGTTTCTGCTCTAGCAGGTGCGGGACACACGGCTCCTCTTCCGGCGCACGCGTGAACGGGAAGAGATCATCCAAGTTTGCATACATTTGGGTTGGTAACTCTGAGACTCAGTGCCCTGGTCAATGCGCGTGGCCGTTCCACCAACCCATTTACGGTCCACAGAACAAGCCTCTTGTTGCGCCCAACAACGATGTCGCTTTGGATGGAATGGTGATCAATGTGGCGAGTCTGTTAGCTGGGACCGCCACGAATCCTTTCGGGAATGGCTACTTTCAGGGACCTAAAGAGGCGCCTTTGGAGGCTGCGTCGGCTTGCACCGGCGTGTATGGGAAAGGAGCTTACCCTGGCTACGCCGGGAACCTCTTGGTGGACCCCACAACTGGTGCTAGTTACAATGCTAACGGCGTTAGTGGAAGGAAATATTTACTTCCAGCGCTCATTGACCCTAAAACCTCAGCTTGCTCCACCCTCGTTTAA 933 0.508 MASNVLIFTLFLTFSLLQLSSARRLTESETQLLKFQHHKGPLLTGQISVNLIWYGKFKPSQRAIIADFITSLSSSPKSTTSQPSVDTWWKTTEKYYHNKSPKLALSLGTQILDEKYSLGKSLTTNQIIKLASKGPQSNAINVVLTSANVVVEGFCSSRCGTHGSSSGARVNGKRSSKFAYIWVGNSETQCPGQCAWPFHQPIYGPQNKPLVAPNNDVALDGMVINVASLLAGTATNPFGNGYFQGPKEAPLEAASACTGVYGKGAYPGYAGNLLVDPTTGASYNANGVSGRKYLLPALIDPKTSACSTLV* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5978 310 Pfam Phosphate-induced protein 1 conserved region 36 309 IPR006766 -
Lja1g5978 310 PANTHER PHOSPHATE-RESPONSIVE 1 FAMILY PROTEIN 4 310 - -
Lja1g5978 310 PANTHER PROTEIN EXORDIUM-LIKE 5 4 310 IPR006766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5978 Lja-Chr1 109898303 109899528 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5978 - - gmx:100799846 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5978 1 109898303 109899528 Lja1g5978 1 109898303 109899528 ECH