Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5969 ATGACCCAATGTTTCAGCTTGACGGAAACCAGAAACCGGTGCTACCGGTCAACGTTCACCGGGTCGGGTCTCCGGTCAACAATAACCGACCTGAAAGATGGAACCATAATGCATTGCTGGGTTCCGGTGACGCGTAACGAGTCGAAACCGAACCTCCTCCTCGTCCACGGCCTGGGAGCCAACGCGCTGTGGCAATGGGGCGACATCATCCGCCACTTGACACCCCACTTCAACGTGTATGTCCCGGACCTCGTTTTCTTCGGCGGGTCATACACGACCCGACCCGAGAGGGGTGAAGAGTTTCAGGCGGAGTGTGTGATGAGGGTGTTGGAGGGGAGGCGCGTGGGGAAGATGACGGTGGTGGGGTTGAGTTATGGTGGGTTTGTGGTGTATAGCTTGGCGGTGAAGTATAGGGAGGTGGTGGAGAGAGTGGTGGTTTGTGGTTCAGGGGTGTGTTTGGAAGAGAGGGATATTAAGGAAGGGGTTTTTCCGGTGTGTGATTTGGAAGAAGCTTGTAGCATTTTGGTGCCGTTGACGCCGGCGAAGCTCCGGGAGCTTGTGAGGTATGCGTTTTTTAGACCTCCTCCGGTGGCTTGGTTTCCCTCTTGCTTCCTCCATGATTTCATTCATGCAATGTGTGTCGACTATGTACAAGAAAAAAGAGAATTGATCCGAGCCATTGCAAAGGATCGAAAACTTTCTGACATACCCAAGATATCTCAGCCTACATTAATTATCTGGGGAGAACATGATCAAGTATTCCCTTTAGAACTTGGTCACAGATTGAAAAGGCATATAGGGGACAATGCTCAAATTGTGGTCCTTAAAAATGCTGGGCATGCTTTCAATGTGGAAAAGGGTAAGGAATTCTTCAGTGTCTTGAAGTCCTTTCTTGTGGATTTGCAGTCACCTGCAGAGAGCTCACTTTCCAAGTGGCAAAATAACAATCCAGTGTGA 957 0.5016 MTQCFSLTETRNRCYRSTFTGSGLRSTITDLKDGTIMHCWVPVTRNESKPNLLLVHGLGANALWQWGDIIRHLTPHFNVYVPDLVFFGGSYTTRPERGEEFQAECVMRVLEGRRVGKMTVVGLSYGGFVVYSLAVKYREVVERVVVCGSGVCLEERDIKEGVFPVCDLEEACSILVPLTPAKLRELVRYAFFRPPPVAWFPSCFLHDFIHAMCVDYVQEKRELIRAIAKDRKLSDIPKISQPTLIIWGEHDQVFPLELGHRLKRHIGDNAQIVVLKNAGHAFNVEKGKEFFSVLKSFLVDLQSPAESSLSKWQNNNPV* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5969 318 PANTHER SI:DKEY-122A22.2 3 304 - -
Lja1g5969 318 PRINTS Alpha/beta hydrolase fold signature 120 133 IPR000073 -
Lja1g5969 318 PRINTS Alpha/beta hydrolase fold signature 76 91 IPR000073 -
Lja1g5969 318 PRINTS Alpha/beta hydrolase fold signature 134 147 IPR000073 -
Lja1g5969 318 PRINTS Alpha/beta hydrolase fold signature 243 257 IPR000073 -
Lja1g5969 318 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 3 304 - -
Lja1g5969 318 Gene3D alpha/beta hydrolase 19 305 IPR029058 -
Lja1g5969 318 SUPERFAMILY alpha/beta-Hydrolases 29 298 IPR029058 -
Lja1g5969 318 Pfam Alpha/beta hydrolase family 52 290 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5969 Lja-Chr1 109532758 109535841 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5969 - - ccaj:109809309 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5969 1 109532758 109535841 Lja1g5969 1 109532758 109535841 ECH